Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.42■□□□□ 0.22
CAPN1P07384 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
CAPN1P07384 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN1P07384 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN1P07384 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN1P07384 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN1P07384 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN1P07384 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN1P07384 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.41■□□□□ 0.22
CAPN1P07384 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN1P07384 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CAPN1P07384 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CAPN1P07384 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN1P07384 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN1P07384 YBX2P1-201ENST00000394192 760 ntBASIC16.41■□□□□ 0.22
CAPN1P07384 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.41■□□□□ 0.22
CAPN1P07384 KRT18P2-201ENST00000447938 1258 ntBASIC16.41■□□□□ 0.22
CAPN1P07384 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.41■□□□□ 0.22
CAPN1P07384 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.41■□□□□ 0.22
CAPN1P07384 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.41■□□□□ 0.22
CAPN1P07384 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN1P07384 AC064836.3-201ENST00000607928 673 ntBASIC16.41■□□□□ 0.22
CAPN1P07384 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.41■□□□□ 0.22
CAPN1P07384 KRT8P49-201ENST00000604166 1432 ntBASIC16.41■□□□□ 0.22
CAPN1P07384 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN1P07384 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN1P07384 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.41■□□□□ 0.22
CAPN1P07384 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.41■□□□□ 0.22
CAPN1P07384 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CAPN1P07384 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN1P07384 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN1P07384 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CAPN1P07384 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN1P07384 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN1P07384 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CAPN1P07384 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN1P07384 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN1P07384 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CAPN1P07384 LINC00895-201ENST00000629028 1637 ntBASIC16.41■□□□□ 0.22
CAPN1P07384 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN1P07384 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CAPN1P07384 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN1P07384 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN1P07384 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN1P07384 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN1P07384 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CAPN1P07384 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN1P07384 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN1P07384 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.4■□□□□ 0.22
CAPN1P07384 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CAPN1P07384 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CAPN1P07384 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN1P07384 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.4■□□□□ 0.22
CAPN1P07384 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN1P07384 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN1P07384 RPSAP43-201ENST00000402237 625 ntBASIC16.4■□□□□ 0.22
CAPN1P07384 UPF3AP3-201ENST00000420996 769 ntBASIC16.4■□□□□ 0.22
CAPN1P07384 IGHV3-65-201ENST00000523210 341 ntBASIC16.4■□□□□ 0.22
CAPN1P07384 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.4■□□□□ 0.22
CAPN1P07384 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN1P07384 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
CAPN1P07384 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.4■□□□□ 0.22
CAPN1P07384 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CAPN1P07384 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN1P07384 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN1P07384 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN1P07384 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.4■□□□□ 0.22
CAPN1P07384 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN1P07384 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CAPN1P07384 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN1P07384 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.4■□□□□ 0.22
CAPN1P07384 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN1P07384 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.4■□□□□ 0.22
CAPN1P07384 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN1P07384 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN1P07384 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CAPN1P07384 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
CAPN1P07384 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN1P07384 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN1P07384 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN1P07384 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.39■□□□□ 0.21
CAPN1P07384 AC092364.2-201ENST00000596710 2692 ntBASIC16.39■□□□□ 0.21
CAPN1P07384 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.39■□□□□ 0.21
CAPN1P07384 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN1P07384 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CAPN1P07384 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN1P07384 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.39■□□□□ 0.21
CAPN1P07384 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.39■□□□□ 0.21
CAPN1P07384 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN1P07384 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.39■□□□□ 0.21
CAPN1P07384 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.39■□□□□ 0.21
CAPN1P07384 AC004832.2-201ENST00000426397 482 ntBASIC16.39■□□□□ 0.21
CAPN1P07384 GPX1P2-201ENST00000429271 606 ntBASIC16.39■□□□□ 0.21
CAPN1P07384 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.39■□□□□ 0.21
CAPN1P07384 AC108073.2-201ENST00000464002 357 ntBASIC16.39■□□□□ 0.21
CAPN1P07384 RPS15P9-201ENST00000494093 319 ntBASIC16.39■□□□□ 0.21
CAPN1P07384 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.39■□□□□ 0.21
CAPN1P07384 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.39■□□□□ 0.21
CAPN1P07384 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.39■□□□□ 0.21
CAPN1P07384 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms