Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.31■□□□□ 0.04
CDHR4A6H8M9 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.31■□□□□ 0.04
CDHR4A6H8M9 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 ACTL9-202ENST00000612068 1252 ntBASIC15.31■□□□□ 0.04
CDHR4A6H8M9 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.31■□□□□ 0.04
CDHR4A6H8M9 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.31■□□□□ 0.04
CDHR4A6H8M9 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 AC108751.1-201ENST00000490852 363 ntBASIC15.3■□□□□ 0.04
CDHR4A6H8M9 RNA5SP419-201ENST00000515908 135 ntBASIC15.3■□□□□ 0.04
CDHR4A6H8M9 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 AC012569.1-201ENST00000591191 1524 ntBASIC15.3■□□□□ 0.04
CDHR4A6H8M9 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDHR4A6H8M9 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDHR4A6H8M9 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDHR4A6H8M9 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CDHR4A6H8M9 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDHR4A6H8M9 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDHR4A6H8M9 PCGF3-213ENST00000620529 1899 ntBASIC15.29■□□□□ 0.04
CDHR4A6H8M9 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.29■□□□□ 0.04
CDHR4A6H8M9 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDHR4A6H8M9 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.29■□□□□ 0.04
CDHR4A6H8M9 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.29■□□□□ 0.04
CDHR4A6H8M9 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CDHR4A6H8M9 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDHR4A6H8M9 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.29■□□□□ 0.04
CDHR4A6H8M9 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.29■□□□□ 0.04
CDHR4A6H8M9 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.29■□□□□ 0.04
CDHR4A6H8M9 MRPL3P1-201ENST00000400109 1033 ntBASIC15.29■□□□□ 0.04
CDHR4A6H8M9 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDHR4A6H8M9 AC098831.1-202ENST00000438821 336 ntBASIC15.29■□□□□ 0.04
CDHR4A6H8M9 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDHR4A6H8M9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.29■□□□□ 0.04
CDHR4A6H8M9 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.29■□□□□ 0.04
CDHR4A6H8M9 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.29■□□□□ 0.04
CDHR4A6H8M9 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.29■□□□□ 0.04
CDHR4A6H8M9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.29■□□□□ 0.04
CDHR4A6H8M9 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
CDHR4A6H8M9 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms