Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 AC019185.2-201ENST00000424628 520 ntTSL 4 BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 PCDHGA9-202ENST00000616887 2568 ntAPPRIS ALT2 BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 LILRA1-202ENST00000453777 2313 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 PLXDC1-206ENST00000444911 2082 ntTSL 2 BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 SEMA4A-205ENST00000368286 3135 ntTSL 5 BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 RUFY4-202ENST00000374155 2977 ntTSL 2 BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 GRPEL2-201ENST00000329271 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 SLC5A11-201ENST00000347898 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 RAPGEF3-201ENST00000389212 3294 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 ATAD3C-201ENST00000378785 3859 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 TMEM130-205ENST00000450876 3891 ntTSL 2 BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 AC107375.1-201ENST00000564464 2231 ntBASIC10.25□□□□□ -0.77
SVIPQ8NHG7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 PAK1-202ENST00000356341 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 ENO4-201ENST00000341276 2865 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 AC092053.3-201ENST00000641308 4975 ntBASIC10.24□□□□□ -0.77
SVIPQ8NHG7 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 RASAL1-203ENST00000446861 3040 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 PUS3-201ENST00000227474 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 MPP4-205ENST00000409474 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 ZFAT-AS1-201ENST00000505776 939 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 AC005785.2-201ENST00000624655 631 ntBASIC10.24□□□□□ -0.77
SVIPQ8NHG7 F7-206ENST00000541084 2873 ntTSL 2 BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 CASP7-201ENST00000345633 2659 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 AC139491.6-202ENST00000637171 2077 ntBASIC10.24□□□□□ -0.77
SVIPQ8NHG7 LINC01588-204ENST00000530176 2444 ntTSL 2 BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 F2R-201ENST00000319211 3821 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 GRID1-AS1-203ENST00000630182 2100 ntTSL 2 BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SVIPQ8NHG7 PPID-201ENST00000307720 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 Z98259.3-202ENST00000641860 2210 ntBASIC10.23□□□□□ -0.77
SVIPQ8NHG7 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms