RNA–Protein interactions for RNA: ENST00000302536.2

VAT1L-201, Transcript of vesicle amine transport 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1L, Length 3,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1L-201ENST00000302536 NISCHQ9Y2I1 1504 aa26.14■■□□□ 1.77
VAT1L-201ENST00000302536 DCAF8L2P0C7V8 631 aa23.19■■□□□ 1.3
VAT1L-201ENST00000302536 SHROOM4Q9ULL8 1493 aa23.04■■□□□ 1.28
VAT1L-201ENST00000302536 SUPT5HO00267 1087 aaKnown RBP22.48■■□□□ 1.19
VAT1L-201ENST00000302536 CCDC180Q9P1Z9 1646 aa21.96■■□□□ 1.11
VAT1L-201ENST00000302536 ZCCHC6Q5VYS8 1495 aaKnown RBP21.91■■□□□ 1.1
VAT1L-201ENST00000302536 ABCC9O60706 1549 aa21.71■■□□□ 1.07
VAT1L-201ENST00000302536 SCRIBQ14160 1630 aa21.24■□□□□ 0.99
VAT1L-201ENST00000302536 EHMT2Q96KQ7 1210 aa21.16■□□□□ 0.98
VAT1L-201ENST00000302536 CHIC1Q5VXU3 224 aa21.14■□□□□ 0.97
VAT1L-201ENST00000302536 PCGF6Q9BYE7 350 aa21.07■□□□□ 0.96
VAT1L-201ENST00000302536 PABPN1Q86U42 306 aaKnown RBP eCLIP21■□□□□ 0.95
VAT1L-201ENST00000302536 DCAF1Q9Y4B6 1507 aa21■□□□□ 0.95
VAT1L-201ENST00000302536 FAM9AQ8IZU1 332 aaPredicted RBP20.96■□□□□ 0.95
VAT1L-201ENST00000302536 PPARGC1BQ86YN6 1023 aaKnown RBP20.93■□□□□ 0.94
VAT1L-201ENST00000302536 LOC105371045A0A1W2PR82 267 aa20.86■□□□□ 0.93
VAT1L-201ENST00000302536 HRCP23327 699 aa20.86■□□□□ 0.93
VAT1L-201ENST00000302536 MYO15BQ96JP2 1530 aa20.77■□□□□ 0.92
VAT1L-201ENST00000302536 CECR2Q9BXF3 1484 aa20.73■□□□□ 0.91
VAT1L-201ENST00000302536 RSF1Q96T23 1441 aaPredicted RBP20.71■□□□□ 0.91
VAT1L-201ENST00000302536 TRIM41Q8WV44 630 aa20.71■□□□□ 0.91
VAT1L-201ENST00000302536 NACADO15069 1562 aa20.66■□□□□ 0.9
VAT1L-201ENST00000302536 PELP1Q8IZL8 1130 aaKnown RBP20.56■□□□□ 0.88
VAT1L-201ENST00000302536 RB1CC1Q8TDY2 1594 aa20.54■□□□□ 0.88
VAT1L-201ENST00000302536 MROH2BQ7Z745 1585 aa20.47■□□□□ 0.87
VAT1L-201ENST00000302536 WIZO95785 1651 aa20.3■□□□□ 0.84
VAT1L-201ENST00000302536 TTBK1Q5TCY1 1321 aaPredicted RBP20.28■□□□□ 0.84
VAT1L-201ENST00000302536 RANGAP1P46060 587 aaPredicted RBP20.15■□□□□ 0.82
VAT1L-201ENST00000302536 BAZ1AQ9NRL2 1556 aaPredicted RBP20.09■□□□□ 0.81
VAT1L-201ENST00000302536 SCAF1Q9H7N4 1312 aaKnown RBP20.04■□□□□ 0.8
VAT1L-201ENST00000302536 UBTFP17480 764 aaKnown RBP19.97■□□□□ 0.79
VAT1L-201ENST00000302536 UNC13AQ9UPW8 1703 aa19.96■□□□□ 0.79
VAT1L-201ENST00000302536 CCDC88BA6NC98 1476 aa19.96■□□□□ 0.79
VAT1L-201ENST00000302536 SMARCA4P51532 1647 aa19.93■□□□□ 0.78
VAT1L-201ENST00000302536 ABCC8Q09428 1581 aa19.92■□□□□ 0.78
VAT1L-201ENST00000302536 BICRAQ9NZM4 1560 aa19.89■□□□□ 0.78
VAT1L-201ENST00000302536 YTHDC1Q96MU7 727 aaKnown RBP19.89■□□□□ 0.77
VAT1L-201ENST00000302536 MYT1Q01538 1121 aa19.79■□□□□ 0.76
VAT1L-201ENST00000302536 TRIM26Q12899 539 aaPredicted RBP19.79■□□□□ 0.76
VAT1L-201ENST00000302536 TOP2AP11388 1531 aaKnown RBP19.79■□□□□ 0.76
VAT1L-201ENST00000302536 BAZ1BQ9UIG0 1483 aaKnown RBP19.75■□□□□ 0.75
VAT1L-201ENST00000302536 SOGA1O94964 1423 aa19.73■□□□□ 0.75
VAT1L-201ENST00000302536 SMARCA2P51531 1590 aa19.71■□□□□ 0.75
VAT1L-201ENST00000302536 ATAD2BQ9ULI0 1458 aa19.69■□□□□ 0.74
VAT1L-201ENST00000302536 CSRNP3Q8WYN3 585 aa19.68■□□□□ 0.74
VAT1L-201ENST00000302536 CCER1Q8TC90 406 aaPredicted RBP19.65■□□□□ 0.74
VAT1L-201ENST00000302536 RUSC2Q8N2Y8 1516 aa19.64■□□□□ 0.73
VAT1L-201ENST00000302536 GTF3C3Q9Y5Q9 886 aa19.61■□□□□ 0.73
VAT1L-201ENST00000302536 WRNQ14191 1432 aaPredicted RBP eCLIP19.59■□□□□ 0.73
VAT1L-201ENST00000302536 CENPBP07199 599 aaPredicted RBP19.55■□□□□ 0.72
VAT1L-201ENST00000302536 ZEB1P37275 1124 aaPredicted RBP19.51■□□□□ 0.71
VAT1L-201ENST00000302536 NEUROD1Q13562 356 aa19.5■□□□□ 0.71
VAT1L-201ENST00000302536 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.48■□□□□ 0.71
VAT1L-201ENST00000302536 ACIN1Q9UKV3 1341 aaKnown RBP19.45■□□□□ 0.7
VAT1L-201ENST00000302536 EIF4G1Q04637 1599 aaKnown RBP19.43■□□□□ 0.7
VAT1L-201ENST00000302536 APLP2Q06481 763 aa19.42■□□□□ 0.7
VAT1L-201ENST00000302536 DNAJC5BQ9UF47 199 aa19.38■□□□□ 0.69
VAT1L-201ENST00000302536 ATP1B4Q9UN42 357 aaPredicted RBP19.38■□□□□ 0.69
VAT1L-201ENST00000302536 CEP162Q5TB80 1403 aa19.37■□□□□ 0.69
VAT1L-201ENST00000302536 HNRNPUL2Q1KMD3 747 aaKnown RBP19.36■□□□□ 0.69
VAT1L-201ENST00000302536 SYNJ1O43426 1573 aa19.3■□□□□ 0.68
VAT1L-201ENST00000302536 P3H3Q8IVL6 736 aa19.27■□□□□ 0.68
VAT1L-201ENST00000302536 NCAPD3P42695 1498 aa19.24■□□□□ 0.67
VAT1L-201ENST00000302536 PEG3Q9GZU2 1588 aa19.23■□□□□ 0.67
VAT1L-201ENST00000302536 DIEXFQ68CQ4 756 aaKnown RBP19.22■□□□□ 0.67
VAT1L-201ENST00000302536 TNIKQ9UKE5 1360 aa19.21■□□□□ 0.67
VAT1L-201ENST00000302536 ITGAEP38570 1179 aa19.21■□□□□ 0.67
VAT1L-201ENST00000302536 GOLGA3Q08378 1498 aa19.2■□□□□ 0.66
VAT1L-201ENST00000302536 RAPGEF2Q9Y4G8 1499 aa19.18■□□□□ 0.66
VAT1L-201ENST00000302536 CLIP1P30622 1438 aa19.17■□□□□ 0.66
VAT1L-201ENST00000302536 EEA1Q15075 1411 aa19.14■□□□□ 0.65
VAT1L-201ENST00000302536 CC2D2AQ9P2K1 1620 aa19.11■□□□□ 0.65
VAT1L-201ENST00000302536 CEP164Q9UPV0 1460 aa19.1■□□□□ 0.65
VAT1L-201ENST00000302536 CADPSQ9ULU8 1353 aa19.1■□□□□ 0.65
VAT1L-201ENST00000302536 NESP48681 1621 aa19.09■□□□□ 0.65
VAT1L-201ENST00000302536 CUX2O14529 1486 aa19.05■□□□□ 0.64
VAT1L-201ENST00000302536 CUX1P39880 1505 aa19.02■□□□□ 0.64
VAT1L-201ENST00000302536 HMGXB3Q12766 1538 aa19.02■□□□□ 0.64
VAT1L-201ENST00000302536 KIF27Q86VH2 1401 aa19.02■□□□□ 0.64
VAT1L-201ENST00000302536 CFTRP13569 1480 aa19.01■□□□□ 0.63
VAT1L-201ENST00000302536 ARID3CA6NKF2 412 aa18.99■□□□□ 0.63
VAT1L-201ENST00000302536 KANK4Q5T7N3 995 aaPredicted RBP18.95■□□□□ 0.62
VAT1L-201ENST00000302536 FANCD2Q9BXW9 1451 aa18.93■□□□□ 0.62
VAT1L-201ENST00000302536 RAD54L2Q9Y4B4 1467 aa18.93■□□□□ 0.62
VAT1L-201ENST00000302536 BCANQ96GW7 911 aa18.93■□□□□ 0.62
VAT1L-201ENST00000302536 TOP2BQ02880 1626 aa18.92■□□□□ 0.62
VAT1L-201ENST00000302536 TDRD9Q8NDG6 1382 aaKnown RBP18.92■□□□□ 0.62
VAT1L-201ENST00000302536 FGD5Q6ZNL6 1462 aa18.89■□□□□ 0.61
VAT1L-201ENST00000302536 CARMIL1Q5VZK9 1371 aa18.88■□□□□ 0.61
VAT1L-201ENST00000302536 IGF1RP08069 1367 aa18.84■□□□□ 0.61
VAT1L-201ENST00000302536 FAM50AQ14320 339 aaKnown RBP18.84■□□□□ 0.61
VAT1L-201ENST00000302536 VPS8Q8N3P4 1428 aa18.83■□□□□ 0.61
VAT1L-201ENST00000302536 FBLN2P98095 1184 aa18.83■□□□□ 0.61
VAT1L-201ENST00000302536 BCL11AQ9H165 835 aa18.82■□□□□ 0.6
VAT1L-201ENST00000302536 KIF21BO75037 1637 aa18.75■□□□□ 0.59
VAT1L-201ENST00000302536 PRXQ9BXM0 1461 aa18.75■□□□□ 0.59
VAT1L-201ENST00000302536 ERICH6Q7L0X2 663 aa18.74■□□□□ 0.59
VAT1L-201ENST00000302536 ARAP1Q96P48 1450 aa18.72■□□□□ 0.59
VAT1L-201ENST00000302536 BIVM-ERCC5R4GMW8 1640 aa18.7■□□□□ 0.58
VAT1L-201ENST00000302536 POLA1P09884 1462 aaPredicted RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms