RNA–Protein interactions for RNA: ENST00000345633.8

CASP7-201, Transcript of caspase 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CASP7, Length 2,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP7-201ENST00000345633 NISCHQ9Y2I1 1504 aa25.08■■□□□ 1.61
CASP7-201ENST00000345633 SHROOM4Q9ULL8 1493 aa22■■□□□ 1.11
CASP7-201ENST00000345633 SUPT5HO00267 1087 aaKnown RBP21.59■■□□□ 1.05
CASP7-201ENST00000345633 DCAF8L2P0C7V8 631 aa21.39■■□□□ 1.01
CASP7-201ENST00000345633 ZCCHC6Q5VYS8 1495 aaKnown RBP21.18■□□□□ 0.98
CASP7-201ENST00000345633 CCDC180Q9P1Z9 1646 aa21.08■□□□□ 0.96
CASP7-201ENST00000345633 HRCP23327 699 aa20.91■□□□□ 0.94
CASP7-201ENST00000345633 MYO15BQ96JP2 1530 aa20.81■□□□□ 0.92
CASP7-201ENST00000345633 CHIC1Q5VXU3 224 aa20.78■□□□□ 0.92
CASP7-201ENST00000345633 PPARGC1BQ86YN6 1023 aaKnown RBP20.47■□□□□ 0.87
CASP7-201ENST00000345633 PCGF6Q9BYE7 350 aa20.44■□□□□ 0.86
CASP7-201ENST00000345633 LOC105371045A0A1W2PR82 267 aa20.42■□□□□ 0.86
CASP7-201ENST00000345633 PELP1Q8IZL8 1130 aaKnown RBP20.36■□□□□ 0.85
CASP7-201ENST00000345633 DCAF1Q9Y4B6 1507 aa20.3■□□□□ 0.84
CASP7-201ENST00000345633 SCRIBQ14160 1630 aa20.19■□□□□ 0.82
CASP7-201ENST00000345633 EHMT2Q96KQ7 1210 aa20.11■□□□□ 0.81
CASP7-201ENST00000345633 FAM9AQ8IZU1 332 aaPredicted RBP20.04■□□□□ 0.8
CASP7-201ENST00000345633 ABCC9O60706 1549 aa20.01■□□□□ 0.79
CASP7-201ENST00000345633 RSF1Q96T23 1441 aaPredicted RBP19.97■□□□□ 0.79
CASP7-201ENST00000345633 TRIM41Q8WV44 630 aa19.91■□□□□ 0.78
CASP7-201ENST00000345633 RB1CC1Q8TDY2 1594 aa19.87■□□□□ 0.77
CASP7-201ENST00000345633 SCAF1Q9H7N4 1312 aaKnown RBP19.85■□□□□ 0.77
CASP7-201ENST00000345633 CECR2Q9BXF3 1484 aa19.78■□□□□ 0.76
CASP7-201ENST00000345633 TRIM26Q12899 539 aaPredicted RBP19.76■□□□□ 0.75
CASP7-201ENST00000345633 MROH2BQ7Z745 1585 aa19.64■□□□□ 0.74
CASP7-201ENST00000345633 ZEB1P37275 1124 aaPredicted RBP19.59■□□□□ 0.73
CASP7-201ENST00000345633 MYT1Q01538 1121 aa19.59■□□□□ 0.73
CASP7-201ENST00000345633 WIZO95785 1651 aa19.59■□□□□ 0.73
CASP7-201ENST00000345633 NACADO15069 1562 aa19.52■□□□□ 0.72
CASP7-201ENST00000345633 TTBK1Q5TCY1 1321 aaPredicted RBP19.43■□□□□ 0.7
CASP7-201ENST00000345633 ACIN1Q9UKV3 1341 aaKnown RBP19.33■□□□□ 0.68
CASP7-201ENST00000345633 ABCC8Q09428 1581 aa19.27■□□□□ 0.68
CASP7-201ENST00000345633 NEUROD1Q13562 356 aa19.27■□□□□ 0.68
CASP7-201ENST00000345633 BAZ1AQ9NRL2 1556 aaPredicted RBP19.25■□□□□ 0.67
CASP7-201ENST00000345633 PABPN1Q86U42 306 aaKnown RBP eCLIP19.25■□□□□ 0.67
CASP7-201ENST00000345633 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.24■□□□□ 0.67
CASP7-201ENST00000345633 GTF3C3Q9Y5Q9 886 aa19.18■□□□□ 0.66
CASP7-201ENST00000345633 CCDC88BA6NC98 1476 aa19.16■□□□□ 0.66
CASP7-201ENST00000345633 UNC13AQ9UPW8 1703 aa19.14■□□□□ 0.65
CASP7-201ENST00000345633 EIF4G1Q04637 1599 aaKnown RBP19.13■□□□□ 0.65
CASP7-201ENST00000345633 SMARCA4P51532 1647 aa19.1■□□□□ 0.65
CASP7-201ENST00000345633 CCER1Q8TC90 406 aaPredicted RBP19.09■□□□□ 0.65
CASP7-201ENST00000345633 SOGA1O94964 1423 aa19.08■□□□□ 0.65
CASP7-201ENST00000345633 TOP2AP11388 1531 aaKnown RBP19.07■□□□□ 0.64
CASP7-201ENST00000345633 CENPBP07199 599 aaPredicted RBP19.05■□□□□ 0.64
CASP7-201ENST00000345633 SMARCA2P51531 1590 aa19.05■□□□□ 0.64
CASP7-201ENST00000345633 RUSC2Q8N2Y8 1516 aa19.04■□□□□ 0.64
CASP7-201ENST00000345633 UBTFP17480 764 aaKnown RBP19.03■□□□□ 0.64
CASP7-201ENST00000345633 RANGAP1P46060 587 aaPredicted RBP18.96■□□□□ 0.63
CASP7-201ENST00000345633 CEP162Q5TB80 1403 aa18.95■□□□□ 0.62
CASP7-201ENST00000345633 DIEXFQ68CQ4 756 aaKnown RBP18.93■□□□□ 0.62
CASP7-201ENST00000345633 CSRNP3Q8WYN3 585 aa18.91■□□□□ 0.62
CASP7-201ENST00000345633 BICRAQ9NZM4 1560 aa18.83■□□□□ 0.6
CASP7-201ENST00000345633 TNIKQ9UKE5 1360 aa18.78■□□□□ 0.6
CASP7-201ENST00000345633 WRNQ14191 1432 aaPredicted RBP eCLIP18.76■□□□□ 0.59
CASP7-201ENST00000345633 HNRNPUL2Q1KMD3 747 aaKnown RBP18.76■□□□□ 0.59
CASP7-201ENST00000345633 SYNJ1O43426 1573 aa18.71■□□□□ 0.59
CASP7-201ENST00000345633 GOLGA3Q08378 1498 aa18.68■□□□□ 0.58
CASP7-201ENST00000345633 EEA1Q15075 1411 aa18.66■□□□□ 0.58
CASP7-201ENST00000345633 YTHDC1Q96MU7 727 aaKnown RBP18.63■□□□□ 0.57
CASP7-201ENST00000345633 ATAD2BQ9ULI0 1458 aa18.61■□□□□ 0.57
CASP7-201ENST00000345633 BAZ1BQ9UIG0 1483 aaKnown RBP18.61■□□□□ 0.57
CASP7-201ENST00000345633 CLIP1P30622 1438 aa18.57■□□□□ 0.56
CASP7-201ENST00000345633 RAPGEF2Q9Y4G8 1499 aa18.56■□□□□ 0.56
CASP7-201ENST00000345633 CEP164Q9UPV0 1460 aa18.54■□□□□ 0.56
CASP7-201ENST00000345633 PEG3Q9GZU2 1588 aa18.53■□□□□ 0.56
CASP7-201ENST00000345633 APLP2Q06481 763 aa18.52■□□□□ 0.56
CASP7-201ENST00000345633 ZNF316A6NFI3 1004 aaPredicted RBP18.52■□□□□ 0.55
CASP7-201ENST00000345633 KIF21BO75037 1637 aa18.44■□□□□ 0.54
CASP7-201ENST00000345633 MIER1Q8N108 512 aa18.42■□□□□ 0.54
CASP7-201ENST00000345633 VPS8Q8N3P4 1428 aa18.41■□□□□ 0.54
CASP7-201ENST00000345633 KANK4Q5T7N3 995 aaPredicted RBP18.35■□□□□ 0.53
CASP7-201ENST00000345633 BCL11AQ9H165 835 aa18.34■□□□□ 0.53
CASP7-201ENST00000345633 ITGAEP38570 1179 aa18.33■□□□□ 0.52
CASP7-201ENST00000345633 TOP2BQ02880 1626 aa18.32■□□□□ 0.52
CASP7-201ENST00000345633 ANP32EQ9BTT0 268 aa18.28■□□□□ 0.52
CASP7-201ENST00000345633 CUX1P39880 1505 aa18.24■□□□□ 0.51
CASP7-201ENST00000345633 SUPT16HQ9Y5B9 1047 aaKnown RBP18.23■□□□□ 0.51
CASP7-201ENST00000345633 ARAP1Q96P48 1450 aa18.22■□□□□ 0.51
CASP7-201ENST00000345633 BIVM-ERCC5R4GMW8 1640 aa18.21■□□□□ 0.51
CASP7-201ENST00000345633 TSHZ2Q9NRE2 1034 aa18.18■□□□□ 0.5
CASP7-201ENST00000345633 PRXQ9BXM0 1461 aa18.18■□□□□ 0.5
CASP7-201ENST00000345633 CLSPNQ9HAW4 1339 aa18.18■□□□□ 0.5
CASP7-201ENST00000345633 KIF27Q86VH2 1401 aa18.13■□□□□ 0.49
CASP7-201ENST00000345633 P3H3Q8IVL6 736 aa18.13■□□□□ 0.49
CASP7-201ENST00000345633 ATP1B4Q9UN42 357 aaPredicted RBP18.12■□□□□ 0.49
CASP7-201ENST00000345633 DHX57Q6P158 1386 aaKnown RBP18.12■□□□□ 0.49
CASP7-201ENST00000345633 NCAPD3P42695 1498 aa18.12■□□□□ 0.49
CASP7-201ENST00000345633 ERICH3Q5RHP9 1530 aa18.1■□□□□ 0.49
CASP7-201ENST00000345633 ARHGAP35Q9NRY4 1499 aa18.06■□□□□ 0.48
CASP7-201ENST00000345633 HMGXB3Q12766 1538 aa18.06■□□□□ 0.48
CASP7-201ENST00000345633 CUX2O14529 1486 aa18.06■□□□□ 0.48
CASP7-201ENST00000345633 CFTRP13569 1480 aa18.05■□□□□ 0.48
CASP7-201ENST00000345633 IGF1RP08069 1367 aa17.98■□□□□ 0.47
CASP7-201ENST00000345633 CCNB3Q8WWL7 1395 aa17.98■□□□□ 0.47
CASP7-201ENST00000345633 FAM50AQ14320 339 aaKnown RBP17.97■□□□□ 0.47
CASP7-201ENST00000345633 RRBP1Q9P2E9 1410 aaKnown RBP17.94■□□□□ 0.46
CASP7-201ENST00000345633 CARMIL1Q5VZK9 1371 aa17.93■□□□□ 0.46
CASP7-201ENST00000345633 FGD5Q6ZNL6 1462 aa17.93■□□□□ 0.46
CASP7-201ENST00000345633 RAB3GAP2Q9H2M9 1393 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms