RNA–Protein interactions for RNA: ENST00000227474.7

PUS3-201, Transcript of pseudouridylate synthase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUS3, Length 1,843 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUS3-201ENST00000227474 NISCHQ9Y2I1 1504 aa18.25■□□□□ 0.51
PUS3-201ENST00000227474 AEBP2Q6ZN18 517 aaPredicted RBP17.87■□□□□ 0.45
PUS3-201ENST00000227474 SLC24A1O60721 1099 aa17.13■□□□□ 0.33
PUS3-201ENST00000227474 CHIC1Q5VXU3 224 aa17■□□□□ 0.31
PUS3-201ENST00000227474 POTEDQ86YR6 584 aa16.17■□□□□ 0.18
PUS3-201ENST00000227474 SENP3Q9H4L4 574 aaPredicted RBP15.76■□□□□ 0.11
PUS3-201ENST00000227474 CCDC180Q9P1Z9 1646 aa15.68■□□□□ 0.1
PUS3-201ENST00000227474 DAXXQ9UER7 740 aaPredicted RBP15.67■□□□□ 0.1
PUS3-201ENST00000227474 EHMT2Q96KQ7 1210 aa15.53■□□□□ 0.08
PUS3-201ENST00000227474 ZCCHC6Q5VYS8 1495 aaKnown RBP15.42■□□□□ 0.06
PUS3-201ENST00000227474 MYT1Q01538 1121 aa15.34■□□□□ 0.05
PUS3-201ENST00000227474 TTBK1Q5TCY1 1321 aaPredicted RBP15.33■□□□□ 0.05
PUS3-201ENST00000227474 PLPPR3Q6T4P5 718 aa15.32■□□□□ 0.04
PUS3-201ENST00000227474 NCBP3Q53F19 620 aaKnown RBP15.26■□□□□ 0.03
PUS3-201ENST00000227474 RTN4Q9NQC3 1192 aaKnown RBP15.22■□□□□ 0.03
PUS3-201ENST00000227474 PHF23Q9BUL5 403 aaPredicted RBP15.2■□□□□ 0.02
PUS3-201ENST00000227474 APLP2Q06481 763 aa15.17■□□□□ 0.02
PUS3-201ENST00000227474 PRKCSHP14314 528 aaPredicted RBP15.13■□□□□ 0.01
PUS3-201ENST00000227474 SHROOM4Q9ULL8 1493 aa15.12■□□□□ 0.01
PUS3-201ENST00000227474 DCAF1Q9Y4B6 1507 aa15.11■□□□□ 0.01
PUS3-201ENST00000227474 PELP1Q8IZL8 1130 aaKnown RBP15.08■□□□□ 0.01
PUS3-201ENST00000227474 ERICH6Q7L0X2 663 aa14.94□□□□□ -0.02
PUS3-201ENST00000227474 DCAF8L2P0C7V8 631 aa14.87□□□□□ -0.03
PUS3-201ENST00000227474 AMER1Q5JTC6 1135 aaPredicted RBP14.82□□□□□ -0.04
PUS3-201ENST00000227474 MYO15BQ96JP2 1530 aa14.79□□□□□ -0.04
PUS3-201ENST00000227474 SUPT5HO00267 1087 aaKnown RBP14.73□□□□□ -0.05
PUS3-201ENST00000227474 ARXQ96QS3 562 aa14.69□□□□□ -0.06
PUS3-201ENST00000227474 FOXD1Q16676 465 aa14.64□□□□□ -0.07
PUS3-201ENST00000227474 KCNA4P22459 653 aa14.6□□□□□ -0.07
PUS3-201ENST00000227474 NACADO15069 1562 aa14.54□□□□□ -0.08
PUS3-201ENST00000227474 TIMELESSQ9UNS1 1208 aa14.52□□□□□ -0.08
PUS3-201ENST00000227474 ABCC9O60706 1549 aa14.49□□□□□ -0.09
PUS3-201ENST00000227474 MSH5O43196 834 aa14.48□□□□□ -0.09
PUS3-201ENST00000227474 SCRIBQ14160 1630 aa14.47□□□□□ -0.09
PUS3-201ENST00000227474 CSRNP3Q8WYN3 585 aa14.43□□□□□ -0.1
PUS3-201ENST00000227474 RSF1Q96T23 1441 aaPredicted RBP14.33□□□□□ -0.12
PUS3-201ENST00000227474 RANGAP1P46060 587 aaPredicted RBP14.3□□□□□ -0.12
PUS3-201ENST00000227474 RB1CC1Q8TDY2 1594 aa14.3□□□□□ -0.12
PUS3-201ENST00000227474 TULP1O00294 542 aaPredicted RBP14.26□□□□□ -0.13
PUS3-201ENST00000227474 TAOK2Q9UL54 1235 aa14.2□□□□□ -0.14
PUS3-201ENST00000227474 HOMEZQ8IX15 550 aa14.2□□□□□ -0.14
PUS3-201ENST00000227474 EIF5BO60841 1220 aaKnown RBP14.18□□□□□ -0.14
PUS3-201ENST00000227474 CECR2Q9BXF3 1484 aa14.16□□□□□ -0.14
PUS3-201ENST00000227474 KLHL34Q8N239 644 aa14.14□□□□□ -0.15
PUS3-201ENST00000227474 MROH2BQ7Z745 1585 aa14.12□□□□□ -0.15
PUS3-201ENST00000227474 BAZ1AQ9NRL2 1556 aaPredicted RBP14.03□□□□□ -0.16
PUS3-201ENST00000227474 WIZO95785 1651 aa13.98□□□□□ -0.17
PUS3-201ENST00000227474 UNC13AQ9UPW8 1703 aa13.97□□□□□ -0.17
PUS3-201ENST00000227474 TPRNQ4KMQ1 711 aa13.94□□□□□ -0.18
PUS3-201ENST00000227474 BCANQ96GW7 911 aa13.94□□□□□ -0.18
PUS3-201ENST00000227474 PODXL2Q9NZ53 605 aa13.94□□□□□ -0.18
PUS3-201ENST00000227474 SMARCA4P51532 1647 aa13.92□□□□□ -0.18
PUS3-201ENST00000227474 BICRAQ9NZM4 1560 aa13.91□□□□□ -0.18
PUS3-201ENST00000227474 TOP2AP11388 1531 aaKnown RBP13.88□□□□□ -0.19
PUS3-201ENST00000227474 EIF4G1Q04637 1599 aaKnown RBP13.83□□□□□ -0.19
PUS3-201ENST00000227474 TRIM41Q8WV44 630 aa13.83□□□□□ -0.2
PUS3-201ENST00000227474 LOC105371045A0A1W2PR82 267 aa13.81□□□□□ -0.2
PUS3-201ENST00000227474 GTF3C3Q9Y5Q9 886 aa13.78□□□□□ -0.2
PUS3-201ENST00000227474 PEG3Q9GZU2 1588 aa13.77□□□□□ -0.21
PUS3-201ENST00000227474 PABPN1Q86U42 306 aaKnown RBP eCLIP13.76□□□□□ -0.21
PUS3-201ENST00000227474 CCDC88BA6NC98 1476 aa13.76□□□□□ -0.21
PUS3-201ENST00000227474 SMARCA2P51531 1590 aa13.75□□□□□ -0.21
PUS3-201ENST00000227474 PLEKHG5O94827 1062 aa13.75□□□□□ -0.21
PUS3-201ENST00000227474 PLCB2Q00722 1185 aa13.65□□□□□ -0.22
PUS3-201ENST00000227474 NPM2Q86SE8 214 aaKnown RBP13.65□□□□□ -0.22
PUS3-201ENST00000227474 ATAD2BQ9ULI0 1458 aa13.63□□□□□ -0.23
PUS3-201ENST00000227474 FAM9AQ8IZU1 332 aaPredicted RBP13.57□□□□□ -0.24
PUS3-201ENST00000227474 PCGF6Q9BYE7 350 aa13.56□□□□□ -0.24
PUS3-201ENST00000227474 ABCC8Q09428 1581 aa13.55□□□□□ -0.24
PUS3-201ENST00000227474 HRCP23327 699 aa13.54□□□□□ -0.24
PUS3-201ENST00000227474 BAZ1BQ9UIG0 1483 aaKnown RBP13.53□□□□□ -0.24
PUS3-201ENST00000227474 SLC4A1APQ9BWU0 796 aaKnown RBP13.53□□□□□ -0.24
PUS3-201ENST00000227474 HAP1P54257 671 aaPredicted RBP13.5□□□□□ -0.25
PUS3-201ENST00000227474 BCL11AQ9H165 835 aa13.5□□□□□ -0.25
PUS3-201ENST00000227474 TRIM26Q12899 539 aaPredicted RBP13.49□□□□□ -0.25
PUS3-201ENST00000227474 EEA1Q15075 1411 aa13.47□□□□□ -0.25
PUS3-201ENST00000227474 TMEM132AQ24JP5 1023 aa13.47□□□□□ -0.25
PUS3-201ENST00000227474 C14orf37Q86TY3 774 aa13.47□□□□□ -0.25
PUS3-201ENST00000227474 NCAPD3P42695 1498 aa13.45□□□□□ -0.26
PUS3-201ENST00000227474 HMGXB3Q12766 1538 aa13.44□□□□□ -0.26
PUS3-201ENST00000227474 WRNQ14191 1432 aaPredicted RBP eCLIP13.44□□□□□ -0.26
PUS3-201ENST00000227474 FBXO3Q9UK99 471 aa13.43□□□□□ -0.26
PUS3-201ENST00000227474 SOGA1O94964 1423 aa13.42□□□□□ -0.26
PUS3-201ENST00000227474 PIAS4Q8N2W9 510 aaPredicted RBP13.41□□□□□ -0.26
PUS3-201ENST00000227474 SYNJ1O43426 1573 aa13.36□□□□□ -0.27
PUS3-201ENST00000227474 RUSC2Q8N2Y8 1516 aa13.35□□□□□ -0.27
PUS3-201ENST00000227474 TNIKQ9UKE5 1360 aa13.35□□□□□ -0.27
PUS3-201ENST00000227474 TOP2BQ02880 1626 aa13.28□□□□□ -0.28
PUS3-201ENST00000227474 GOLGA3Q08378 1498 aa13.28□□□□□ -0.28
PUS3-201ENST00000227474 CEP162Q5TB80 1403 aa13.28□□□□□ -0.28
PUS3-201ENST00000227474 CFTRP13569 1480 aa13.26□□□□□ -0.29
PUS3-201ENST00000227474 KIF21BO75037 1637 aa13.25□□□□□ -0.29
PUS3-201ENST00000227474 BIVM-ERCC5R4GMW8 1640 aa13.25□□□□□ -0.29
PUS3-201ENST00000227474 CEP164Q9UPV0 1460 aa13.24□□□□□ -0.29
PUS3-201ENST00000227474 VSIG10Q8N0Z9 540 aa13.2□□□□□ -0.3
PUS3-201ENST00000227474 PDIA4P13667 645 aaKnown RBP13.17□□□□□ -0.3
PUS3-201ENST00000227474 UBTFP17480 764 aaKnown RBP13.17□□□□□ -0.3
PUS3-201ENST00000227474 CUX1P39880 1505 aa13.17□□□□□ -0.3
PUS3-201ENST00000227474 ZEB1P37275 1124 aaPredicted RBP13.16□□□□□ -0.3
PUS3-201ENST00000227474 PPARGC1BQ86YN6 1023 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms