RNA–Protein interactions for RNA: ENST00000530176.5

LINC01588-204, Transcript of long intergenic non-protein coding RNA 1588, humanhuman

TSL 2 BASIC

Gene LINC01588, Length 2,444 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01588-204ENST00000530176 NISCHQ9Y2I1 1504 aa24.31■■□□□ 1.48
LINC01588-204ENST00000530176 CCDC180Q9P1Z9 1646 aa20.99■□□□□ 0.95
LINC01588-204ENST00000530176 ZCCHC6Q5VYS8 1495 aaKnown RBP20.49■□□□□ 0.87
LINC01588-204ENST00000530176 SHROOM4Q9ULL8 1493 aa20.23■□□□□ 0.83
LINC01588-204ENST00000530176 DCAF8L2P0C7V8 631 aa20.13■□□□□ 0.81
LINC01588-204ENST00000530176 DCAF1Q9Y4B6 1507 aa20.01■□□□□ 0.79
LINC01588-204ENST00000530176 ABCC9O60706 1549 aa19.75■□□□□ 0.75
LINC01588-204ENST00000530176 MYO15BQ96JP2 1530 aa19.64■□□□□ 0.73
LINC01588-204ENST00000530176 SUPT5HO00267 1087 aaKnown RBP19.57■□□□□ 0.72
LINC01588-204ENST00000530176 SCRIBQ14160 1630 aa19.5■□□□□ 0.71
LINC01588-204ENST00000530176 NACADO15069 1562 aa19.49■□□□□ 0.71
LINC01588-204ENST00000530176 RB1CC1Q8TDY2 1594 aa19.28■□□□□ 0.68
LINC01588-204ENST00000530176 RSF1Q96T23 1441 aaPredicted RBP19.01■□□□□ 0.63
LINC01588-204ENST00000530176 UNC13AQ9UPW8 1703 aa18.96■□□□□ 0.63
LINC01588-204ENST00000530176 CECR2Q9BXF3 1484 aa18.95■□□□□ 0.62
LINC01588-204ENST00000530176 MROH2BQ7Z745 1585 aa18.85■□□□□ 0.61
LINC01588-204ENST00000530176 CHIC1Q5VXU3 224 aa18.82■□□□□ 0.6
LINC01588-204ENST00000530176 BICRAQ9NZM4 1560 aa18.75■□□□□ 0.59
LINC01588-204ENST00000530176 BAZ1AQ9NRL2 1556 aaPredicted RBP18.73■□□□□ 0.59
LINC01588-204ENST00000530176 WIZO95785 1651 aa18.72■□□□□ 0.59
LINC01588-204ENST00000530176 PABPN1Q86U42 306 aaKnown RBP eCLIP18.72■□□□□ 0.59
LINC01588-204ENST00000530176 SMARCA4P51532 1647 aa18.64■□□□□ 0.57
LINC01588-204ENST00000530176 TOP2AP11388 1531 aaKnown RBP18.47■□□□□ 0.55
LINC01588-204ENST00000530176 PEG3Q9GZU2 1588 aa18.34■□□□□ 0.53
LINC01588-204ENST00000530176 SMARCA2P51531 1590 aa18.34■□□□□ 0.53
LINC01588-204ENST00000530176 CCDC88BA6NC98 1476 aa18.32■□□□□ 0.52
LINC01588-204ENST00000530176 TRIM41Q8WV44 630 aa18.31■□□□□ 0.52
LINC01588-204ENST00000530176 EIF4G1Q04637 1599 aaKnown RBP18.31■□□□□ 0.52
LINC01588-204ENST00000530176 ATAD2BQ9ULI0 1458 aa18.26■□□□□ 0.51
LINC01588-204ENST00000530176 LOC105371045A0A1W2PR82 267 aa18.19■□□□□ 0.5
LINC01588-204ENST00000530176 BAZ1BQ9UIG0 1483 aaKnown RBP18.19■□□□□ 0.5
LINC01588-204ENST00000530176 ABCC8Q09428 1581 aa18.11■□□□□ 0.49
LINC01588-204ENST00000530176 FAM9AQ8IZU1 332 aaPredicted RBP18.09■□□□□ 0.49
LINC01588-204ENST00000530176 NCAPD3P42695 1498 aa18.01■□□□□ 0.47
LINC01588-204ENST00000530176 HMGXB3Q12766 1538 aa18.01■□□□□ 0.47
LINC01588-204ENST00000530176 EHMT2Q96KQ7 1210 aa17.9■□□□□ 0.46
LINC01588-204ENST00000530176 WRNQ14191 1432 aaPredicted RBP eCLIP17.88■□□□□ 0.45
LINC01588-204ENST00000530176 SYNJ1O43426 1573 aa17.83■□□□□ 0.44
LINC01588-204ENST00000530176 CC2D2AQ9P2K1 1620 aa17.83■□□□□ 0.44
LINC01588-204ENST00000530176 SOGA1O94964 1423 aa17.82■□□□□ 0.44
LINC01588-204ENST00000530176 RUSC2Q8N2Y8 1516 aa17.74■□□□□ 0.43
LINC01588-204ENST00000530176 CFTRP13569 1480 aa17.72■□□□□ 0.43
LINC01588-204ENST00000530176 EEA1Q15075 1411 aa17.7■□□□□ 0.42
LINC01588-204ENST00000530176 TOP2BQ02880 1626 aa17.68■□□□□ 0.42
LINC01588-204ENST00000530176 PCGF6Q9BYE7 350 aa17.67■□□□□ 0.42
LINC01588-204ENST00000530176 CSRNP3Q8WYN3 585 aa17.64■□□□□ 0.42
LINC01588-204ENST00000530176 BIVM-ERCC5R4GMW8 1640 aa17.64■□□□□ 0.41
LINC01588-204ENST00000530176 PRDM2Q13029 1718 aa17.61■□□□□ 0.41
LINC01588-204ENST00000530176 CUX1P39880 1505 aa17.6■□□□□ 0.41
LINC01588-204ENST00000530176 CADPSQ9ULU8 1353 aa17.6■□□□□ 0.41
LINC01588-204ENST00000530176 GOLGA3Q08378 1498 aa17.54■□□□□ 0.4
LINC01588-204ENST00000530176 TNIKQ9UKE5 1360 aa17.52■□□□□ 0.4
LINC01588-204ENST00000530176 CEP162Q5TB80 1403 aa17.51■□□□□ 0.39
LINC01588-204ENST00000530176 UBTFP17480 764 aaKnown RBP17.5■□□□□ 0.39
LINC01588-204ENST00000530176 CEP164Q9UPV0 1460 aa17.5■□□□□ 0.39
LINC01588-204ENST00000530176 KIF21BO75037 1637 aa17.5■□□□□ 0.39
LINC01588-204ENST00000530176 TRIM26Q12899 539 aaPredicted RBP17.5■□□□□ 0.39
LINC01588-204ENST00000530176 NESP48681 1621 aa17.44■□□□□ 0.38
LINC01588-204ENST00000530176 FANCD2Q9BXW9 1451 aa17.44■□□□□ 0.38
LINC01588-204ENST00000530176 RAPGEF2Q9Y4G8 1499 aa17.42■□□□□ 0.38
LINC01588-204ENST00000530176 DNAJC5BQ9UF47 199 aa17.41■□□□□ 0.38
LINC01588-204ENST00000530176 PPARGC1BQ86YN6 1023 aaKnown RBP17.38■□□□□ 0.37
LINC01588-204ENST00000530176 KIF27Q86VH2 1401 aa17.38■□□□□ 0.37
LINC01588-204ENST00000530176 SLC24A1O60721 1099 aa17.37■□□□□ 0.37
LINC01588-204ENST00000530176 FGD5Q6ZNL6 1462 aa17.36■□□□□ 0.37
LINC01588-204ENST00000530176 HRCP23327 699 aa17.35■□□□□ 0.37
LINC01588-204ENST00000530176 LAMC3Q9Y6N6 1575 aa17.34■□□□□ 0.37
LINC01588-204ENST00000530176 PRXQ9BXM0 1461 aa17.34■□□□□ 0.37
LINC01588-204ENST00000530176 ERICH3Q5RHP9 1530 aa17.32■□□□□ 0.36
LINC01588-204ENST00000530176 CUX2O14529 1486 aa17.31■□□□□ 0.36
LINC01588-204ENST00000530176 DNMBPQ6XZF7 1577 aa17.3■□□□□ 0.36
LINC01588-204ENST00000530176 CLIP1P30622 1438 aa17.3■□□□□ 0.36
LINC01588-204ENST00000530176 TOPBP1Q92547 1522 aa17.28■□□□□ 0.36
LINC01588-204ENST00000530176 RANGAP1P46060 587 aaPredicted RBP17.24■□□□□ 0.35
LINC01588-204ENST00000530176 POLA1P09884 1462 aaPredicted RBP17.23■□□□□ 0.35
LINC01588-204ENST00000530176 URB2Q14146 1524 aaKnown RBP17.21■□□□□ 0.35
LINC01588-204ENST00000530176 PDS5BQ9NTI5 1447 aa17.21■□□□□ 0.35
LINC01588-204ENST00000530176 TTBK1Q5TCY1 1321 aaPredicted RBP17.21■□□□□ 0.35
LINC01588-204ENST00000530176 RAD54L2Q9Y4B4 1467 aa17.21■□□□□ 0.35
LINC01588-204ENST00000530176 IGF1RP08069 1367 aa17.21■□□□□ 0.35
LINC01588-204ENST00000530176 KIF21AQ7Z4S6 1674 aa17.19■□□□□ 0.34
LINC01588-204ENST00000530176 VPS8Q8N3P4 1428 aa17.17■□□□□ 0.34
LINC01588-204ENST00000530176 ABCA10Q8WWZ4 1543 aa17.17■□□□□ 0.34
LINC01588-204ENST00000530176 CARMIL1Q5VZK9 1371 aa17.13■□□□□ 0.33
LINC01588-204ENST00000530176 ARAP1Q96P48 1450 aa17.1■□□□□ 0.33
LINC01588-204ENST00000530176 WDR97A6NE52 1622 aa17.09■□□□□ 0.33
LINC01588-204ENST00000530176 ARHGAP35Q9NRY4 1499 aa17.03■□□□□ 0.32
LINC01588-204ENST00000530176 TDRD9Q8NDG6 1382 aaKnown RBP17.02■□□□□ 0.32
LINC01588-204ENST00000530176 ABCA5Q8WWZ7 1642 aa17.02■□□□□ 0.31
LINC01588-204ENST00000530176 CUL7Q14999 1698 aa17.01■□□□□ 0.31
LINC01588-204ENST00000530176 APLP2Q06481 763 aa17■□□□□ 0.31
LINC01588-204ENST00000530176 MRC2Q9UBG0 1479 aa17■□□□□ 0.31
LINC01588-204ENST00000530176 TARBP1Q13395 1621 aaKnown RBP16.98■□□□□ 0.31
LINC01588-204ENST00000530176 GAPVD1Q14C86 1478 aa16.97■□□□□ 0.31
LINC01588-204ENST00000530176 CTTNBP2Q8WZ74 1663 aa16.89■□□□□ 0.29
LINC01588-204ENST00000530176 WDR62O43379 1518 aa16.89■□□□□ 0.29
LINC01588-204ENST00000530176 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.88■□□□□ 0.29
LINC01588-204ENST00000530176 ZEB1P37275 1124 aaPredicted RBP16.88■□□□□ 0.29
LINC01588-204ENST00000530176 ERCC6Q03468 1493 aa16.87■□□□□ 0.29
LINC01588-204ENST00000530176 KANK4Q5T7N3 995 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms