Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 AC020765.3-201ENST00000613051 740 ntBASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 AC008267.7-201ENST00000624570 1194 ntBASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 PCDHA12-202ENST00000613593 2588 ntBASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 HLA-A-202ENST00000376806 1854 ntBASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 AD000864.1-201ENST00000624076 2295 ntBASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 AC020916.1-201ENST00000587762 1774 ntBASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 GPAA1P2-202ENST00000606848 1787 ntBASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 AL627223.1-201ENST00000416693 442 ntBASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 AC092183.1-201ENST00000469884 875 ntBASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 KRT8P23-201ENST00000560090 1207 ntBASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 AC027307.2-201ENST00000591252 911 ntBASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM4Q86VH4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 AC023141.5-201ENST00000458585 616 ntBASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 AC069335.1-201ENST00000489972 472 ntBASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 AC027612.4-201ENST00000605371 583 ntBASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms