Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCGF3Q3KNV8 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PCGF3Q3KNV8 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 AC009336.1-201ENST00000608941 1553 ntBASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 AC139887.3-201ENST00000568585 713 ntBASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 FAM215A-202ENST00000632077 792 ntBASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.83□□□□□ -0.04
PCGF3Q3KNV8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 AC105917.1-201ENST00000506637 2539 ntBASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 SLC25A1P3-201ENST00000395415 828 ntBASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 RPS2P1-201ENST00000434010 821 ntBASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 BX640515.1-201ENST00000617215 977 ntBASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 AC008735.5-201ENST00000623544 497 ntBASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 NCF1C-201ENST00000438382 1427 ntBASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF3Q3KNV8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms