Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 KRT8P50-201ENST00000562022 1438 ntBASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 AP006587.1-201ENST00000534129 1502 ntBASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 AL645728.1-201ENST00000366221 2101 ntBASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 AC089987.1-201ENST00000551654 2209 ntBASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 AGAP7P-201ENST00000582299 2062 ntBASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 AGAP14-201ENST00000624701 2060 ntBASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
LINC01558Q9Y6Z2 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 AC135279.3-201ENST00000610945 1311 ntBASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 API5-202ENST00000420461 2009 ntTSL 2 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 INVS-201ENST00000262456 2968 ntTSL 5 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms