Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC073439.1-201ENST00000624121 1774 ntBASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 AC142381.1-201ENST00000426099 345 ntBASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 AC105233.2-201ENST00000523697 349 ntBASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 AF228730.5-201ENST00000530288 346 ntBASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 AP000842.3-202ENST00000569238 1080 ntBASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 PRORSD1P-202ENST00000563365 2154 ntBASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 AC011676.5-201ENST00000624864 2660 ntBASIC16.61■□□□□ 0.25
ECHDC3Q96DC8 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 UBALD1-205ENST00000590891 2641 ntBASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 FAM58DP-201ENST00000428076 619 ntBASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 PRYP6-201ENST00000514804 343 ntBASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 IGHV3-62-201ENST00000520057 340 ntBASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 PCDHA12-202ENST00000613593 2588 ntBASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ECHDC3Q96DC8 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 PCGF3-213ENST00000620529 1899 ntBASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 GPS2P2-201ENST00000430745 888 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms