Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
KDELR3O43731 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
KDELR3O43731 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KDELR3O43731 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.86■□□□□ 0.29
KDELR3O43731 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
KDELR3O43731 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KDELR3O43731 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KDELR3O43731 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.86■□□□□ 0.29
KDELR3O43731 AL592309.1-201ENST00000443127 649 ntBASIC16.86■□□□□ 0.29
KDELR3O43731 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
KDELR3O43731 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.86■□□□□ 0.29
KDELR3O43731 LINC01225-203ENST00000563550 1244 ntBASIC16.86■□□□□ 0.29
KDELR3O43731 AL138918.1-201ENST00000568306 659 ntBASIC16.86■□□□□ 0.29
KDELR3O43731 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
KDELR3O43731 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
KDELR3O43731 AC008267.7-201ENST00000624570 1194 ntBASIC16.86■□□□□ 0.29
KDELR3O43731 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.86■□□□□ 0.29
KDELR3O43731 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
KDELR3O43731 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KDELR3O43731 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
KDELR3O43731 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KDELR3O43731 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
KDELR3O43731 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.86■□□□□ 0.29
KDELR3O43731 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.86■□□□□ 0.29
KDELR3O43731 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KDELR3O43731 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.86■□□□□ 0.29
KDELR3O43731 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KDELR3O43731 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
KDELR3O43731 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KDELR3O43731 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KDELR3O43731 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
KDELR3O43731 PCGF3-213ENST00000620529 1899 ntBASIC16.86■□□□□ 0.29
KDELR3O43731 AC009053.2-201ENST00000563701 2365 ntBASIC16.86■□□□□ 0.29
KDELR3O43731 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
KDELR3O43731 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.86■□□□□ 0.29
KDELR3O43731 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KDELR3O43731 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.85■□□□□ 0.29
KDELR3O43731 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.85■□□□□ 0.29
KDELR3O43731 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KDELR3O43731 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KDELR3O43731 LINC01144-201ENST00000626198 1710 ntBASIC16.85■□□□□ 0.29
KDELR3O43731 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KDELR3O43731 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.85■□□□□ 0.29
KDELR3O43731 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
KDELR3O43731 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
KDELR3O43731 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KDELR3O43731 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.85■□□□□ 0.29
KDELR3O43731 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.85■□□□□ 0.29
KDELR3O43731 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.85■□□□□ 0.29
KDELR3O43731 CNN2P11-201ENST00000429351 262 ntBASIC16.85■□□□□ 0.29
KDELR3O43731 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.85■□□□□ 0.29
KDELR3O43731 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
KDELR3O43731 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
KDELR3O43731 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
KDELR3O43731 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KDELR3O43731 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.85■□□□□ 0.29
KDELR3O43731 SNHG9-202ENST00000564014 471 ntBASIC16.85■□□□□ 0.29
KDELR3O43731 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.85■□□□□ 0.29
KDELR3O43731 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.85■□□□□ 0.29
KDELR3O43731 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.85■□□□□ 0.29
KDELR3O43731 AC027307.2-201ENST00000591252 911 ntBASIC16.85■□□□□ 0.29
KDELR3O43731 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.85■□□□□ 0.29
KDELR3O43731 AC004835.2-201ENST00000603762 682 ntBASIC16.85■□□□□ 0.29
KDELR3O43731 AL596442.2-201ENST00000610240 980 ntBASIC16.85■□□□□ 0.29
KDELR3O43731 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
KDELR3O43731 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
KDELR3O43731 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
KDELR3O43731 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
KDELR3O43731 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KDELR3O43731 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
KDELR3O43731 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KDELR3O43731 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.85■□□□□ 0.29
KDELR3O43731 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.85■□□□□ 0.29
KDELR3O43731 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.85■□□□□ 0.29
KDELR3O43731 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
KDELR3O43731 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KDELR3O43731 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KDELR3O43731 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KDELR3O43731 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
KDELR3O43731 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KDELR3O43731 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
KDELR3O43731 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
KDELR3O43731 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.85■□□□□ 0.29
KDELR3O43731 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.84■□□□□ 0.29
KDELR3O43731 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.84■□□□□ 0.29
KDELR3O43731 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KDELR3O43731 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KDELR3O43731 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
KDELR3O43731 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
KDELR3O43731 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KDELR3O43731 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
KDELR3O43731 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
KDELR3O43731 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.84■□□□□ 0.29
KDELR3O43731 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
KDELR3O43731 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
KDELR3O43731 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.84■□□□□ 0.29
KDELR3O43731 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KDELR3O43731 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KDELR3O43731 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
KDELR3O43731 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms