Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
COLCA2A8K830 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
COLCA2A8K830 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COLCA2A8K830 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC12.79□□□□□ -0.36
COLCA2A8K830 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COLCA2A8K830 AC091305.1-201ENST00000479476 895 ntBASIC12.79□□□□□ -0.36
COLCA2A8K830 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC12.79□□□□□ -0.36
COLCA2A8K830 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC12.79□□□□□ -0.36
COLCA2A8K830 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
COLCA2A8K830 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COLCA2A8K830 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
COLCA2A8K830 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COLCA2A8K830 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.79□□□□□ -0.36
COLCA2A8K830 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.79□□□□□ -0.36
COLCA2A8K830 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COLCA2A8K830 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.79□□□□□ -0.36
COLCA2A8K830 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
COLCA2A8K830 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
COLCA2A8K830 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
COLCA2A8K830 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COLCA2A8K830 PPT1-213ENST00000641319 2388 ntBASIC12.79□□□□□ -0.36
COLCA2A8K830 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
COLCA2A8K830 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
COLCA2A8K830 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COLCA2A8K830 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COLCA2A8K830 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.79□□□□□ -0.36
COLCA2A8K830 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.79□□□□□ -0.36
COLCA2A8K830 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COLCA2A8K830 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
COLCA2A8K830 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COLCA2A8K830 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
COLCA2A8K830 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COLCA2A8K830 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COLCA2A8K830 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
COLCA2A8K830 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
COLCA2A8K830 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COLCA2A8K830 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
COLCA2A8K830 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COLCA2A8K830 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COLCA2A8K830 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COLCA2A8K830 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COLCA2A8K830 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
COLCA2A8K830 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.78□□□□□ -0.36
COLCA2A8K830 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COLCA2A8K830 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COLCA2A8K830 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COLCA2A8K830 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
COLCA2A8K830 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.78□□□□□ -0.36
COLCA2A8K830 LINC00895-201ENST00000629028 1637 ntBASIC12.78□□□□□ -0.36
COLCA2A8K830 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COLCA2A8K830 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COLCA2A8K830 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COLCA2A8K830 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
COLCA2A8K830 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
COLCA2A8K830 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC12.78□□□□□ -0.36
COLCA2A8K830 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC12.78□□□□□ -0.36
COLCA2A8K830 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COLCA2A8K830 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
COLCA2A8K830 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COLCA2A8K830 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COLCA2A8K830 AC002558.1-201ENST00000488906 803 ntBASIC12.78□□□□□ -0.36
COLCA2A8K830 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COLCA2A8K830 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC12.78□□□□□ -0.36
COLCA2A8K830 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC12.78□□□□□ -0.36
COLCA2A8K830 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC12.78□□□□□ -0.36
COLCA2A8K830 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
COLCA2A8K830 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC12.78□□□□□ -0.36
COLCA2A8K830 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
COLCA2A8K830 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COLCA2A8K830 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COLCA2A8K830 AC089987.1-201ENST00000551654 2209 ntBASIC12.78□□□□□ -0.36
COLCA2A8K830 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COLCA2A8K830 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
COLCA2A8K830 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.78□□□□□ -0.36
COLCA2A8K830 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
COLCA2A8K830 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COLCA2A8K830 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.78□□□□□ -0.36
COLCA2A8K830 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
COLCA2A8K830 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COLCA2A8K830 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COLCA2A8K830 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC12.78□□□□□ -0.36
COLCA2A8K830 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COLCA2A8K830 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
COLCA2A8K830 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
COLCA2A8K830 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
COLCA2A8K830 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
COLCA2A8K830 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
COLCA2A8K830 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
COLCA2A8K830 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
COLCA2A8K830 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.77□□□□□ -0.36
COLCA2A8K830 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
COLCA2A8K830 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
COLCA2A8K830 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.77□□□□□ -0.36
COLCA2A8K830 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
COLCA2A8K830 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
COLCA2A8K830 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.77□□□□□ -0.36
COLCA2A8K830 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
COLCA2A8K830 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC12.77□□□□□ -0.36
COLCA2A8K830 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
COLCA2A8K830 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms