Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 AC087388.1-201ENST00000571370 1112 ntBASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 AP005117.1-201ENST00000584346 1413 ntBASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 AC013268.4-201ENST00000637413 2228 ntBASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 AL591684.3-201ENST00000605187 298 ntBASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 AL590326.2-201ENST00000625139 305 ntBASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 AP000550.4-202ENST00000639755 178 ntBASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 NCF1C-201ENST00000438382 1427 ntBASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-7A0A0A0MS04 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 AC073347.1-201ENST00000421633 2643 ntBASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-7A0A0A0MS04 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms