Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MMP13P45452 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP13P45452 HLA-A-201ENST00000376802 1334 ntBASIC17.4■□□□□ 0.38
MMP13P45452 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP13P45452 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.4■□□□□ 0.38
MMP13P45452 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.4■□□□□ 0.38
MMP13P45452 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
MMP13P45452 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP13P45452 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MMP13P45452 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP13P45452 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP13P45452 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
MMP13P45452 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.39■□□□□ 0.38
MMP13P45452 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP13P45452 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP13P45452 AC092850.2-201ENST00000623821 2697 ntBASIC17.39■□□□□ 0.37
MMP13P45452 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MMP13P45452 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
MMP13P45452 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP13P45452 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MMP13P45452 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP13P45452 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP13P45452 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
MMP13P45452 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.39■□□□□ 0.37
MMP13P45452 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.39■□□□□ 0.37
MMP13P45452 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP13P45452 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP13P45452 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP13P45452 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.39■□□□□ 0.37
MMP13P45452 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.39■□□□□ 0.37
MMP13P45452 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.39■□□□□ 0.37
MMP13P45452 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.39■□□□□ 0.37
MMP13P45452 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.39■□□□□ 0.37
MMP13P45452 TERC-201ENST00000602385 541 ntBASIC17.39■□□□□ 0.37
MMP13P45452 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.39■□□□□ 0.37
MMP13P45452 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
MMP13P45452 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MMP13P45452 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.39■□□□□ 0.37
MMP13P45452 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.39■□□□□ 0.37
MMP13P45452 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP13P45452 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP13P45452 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP13P45452 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.39■□□□□ 0.37
MMP13P45452 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP13P45452 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.38■□□□□ 0.37
MMP13P45452 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.38■□□□□ 0.37
MMP13P45452 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MMP13P45452 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP13P45452 AC104640.1-201ENST00000562617 2109 ntBASIC17.38■□□□□ 0.37
MMP13P45452 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP13P45452 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP13P45452 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP13P45452 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP13P45452 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
MMP13P45452 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP13P45452 PAWRP1-201ENST00000451083 565 ntBASIC17.38■□□□□ 0.37
MMP13P45452 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.38■□□□□ 0.37
MMP13P45452 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.38■□□□□ 0.37
MMP13P45452 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.38■□□□□ 0.37
MMP13P45452 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.38■□□□□ 0.37
MMP13P45452 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.38■□□□□ 0.37
MMP13P45452 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP13P45452 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
MMP13P45452 AF228730.7-201ENST00000641842 219 ntBASIC17.38■□□□□ 0.37
MMP13P45452 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
MMP13P45452 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MMP13P45452 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
MMP13P45452 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.38■□□□□ 0.37
MMP13P45452 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
MMP13P45452 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MMP13P45452 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP13P45452 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MMP13P45452 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MMP13P45452 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.38■□□□□ 0.37
MMP13P45452 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
MMP13P45452 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP13P45452 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP13P45452 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP13P45452 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.37■□□□□ 0.37
MMP13P45452 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP13P45452 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP13P45452 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP13P45452 MTHFR-217ENST00000641820 1569 ntBASIC17.37■□□□□ 0.37
MMP13P45452 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.37■□□□□ 0.37
MMP13P45452 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP13P45452 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP13P45452 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.37■□□□□ 0.37
MMP13P45452 AC005052.1-201ENST00000625181 2492 ntBASIC17.37■□□□□ 0.37
MMP13P45452 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.37■□□□□ 0.37
MMP13P45452 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP13P45452 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.37■□□□□ 0.37
MMP13P45452 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.37■□□□□ 0.37
MMP13P45452 FDX1P1-201ENST00000449115 551 ntBASIC17.37■□□□□ 0.37
MMP13P45452 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.37■□□□□ 0.37
MMP13P45452 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
MMP13P45452 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.37■□□□□ 0.37
MMP13P45452 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
MMP13P45452 AC008667.4-201ENST00000607370 168 ntBASIC17.37■□□□□ 0.37
MMP13P45452 AC116407.3-201ENST00000623905 1129 ntBASIC17.37■□□□□ 0.37
MMP13P45452 AC117500.6-201ENST00000624871 588 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms