Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 KRT18P34-201ENST00000488218 1270 ntBASIC17.56■□□□□ 0.4
GRIK1P39086 AC069335.1-201ENST00000489972 472 ntBASIC17.56■□□□□ 0.4
GRIK1P39086 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.56■□□□□ 0.4
GRIK1P39086 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.56■□□□□ 0.4
GRIK1P39086 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.56■□□□□ 0.4
GRIK1P39086 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.56■□□□□ 0.4
GRIK1P39086 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GRIK1P39086 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
GRIK1P39086 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
GRIK1P39086 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
GRIK1P39086 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.56■□□□□ 0.4
GRIK1P39086 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.56■□□□□ 0.4
GRIK1P39086 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GRIK1P39086 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GRIK1P39086 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GRIK1P39086 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GRIK1P39086 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GRIK1P39086 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.56■□□□□ 0.4
GRIK1P39086 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GRIK1P39086 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GRIK1P39086 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
GRIK1P39086 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
GRIK1P39086 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
GRIK1P39086 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.55■□□□□ 0.4
GRIK1P39086 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
GRIK1P39086 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GRIK1P39086 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
GRIK1P39086 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GRIK1P39086 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GRIK1P39086 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
GRIK1P39086 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GRIK1P39086 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.55■□□□□ 0.4
GRIK1P39086 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.55■□□□□ 0.4
GRIK1P39086 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.55■□□□□ 0.4
GRIK1P39086 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GRIK1P39086 HLA-J-203ENST00000494367 1087 ntBASIC17.55■□□□□ 0.4
GRIK1P39086 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.55■□□□□ 0.4
GRIK1P39086 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.55■□□□□ 0.4
GRIK1P39086 AC093028.1-201ENST00000622998 982 ntBASIC17.55■□□□□ 0.4
GRIK1P39086 LINC00628-201ENST00000628516 1289 ntBASIC17.55■□□□□ 0.4
GRIK1P39086 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
GRIK1P39086 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.55■□□□□ 0.4
GRIK1P39086 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GRIK1P39086 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.55■□□□□ 0.4
GRIK1P39086 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GRIK1P39086 SNX33P1-201ENST00000592116 1762 ntBASIC17.55■□□□□ 0.4
GRIK1P39086 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GRIK1P39086 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GRIK1P39086 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GRIK1P39086 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GRIK1P39086 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GRIK1P39086 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GRIK1P39086 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.55■□□□□ 0.4
GRIK1P39086 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
GRIK1P39086 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GRIK1P39086 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GRIK1P39086 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GRIK1P39086 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GRIK1P39086 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GRIK1P39086 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GRIK1P39086 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
GRIK1P39086 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GRIK1P39086 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
GRIK1P39086 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GRIK1P39086 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
GRIK1P39086 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
GRIK1P39086 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GRIK1P39086 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GRIK1P39086 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.54■□□□□ 0.4
GRIK1P39086 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GRIK1P39086 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GRIK1P39086 AL645939.2-201ENST00000427340 991 ntBASIC17.54■□□□□ 0.4
GRIK1P39086 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.54■□□□□ 0.4
GRIK1P39086 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.54■□□□□ 0.4
GRIK1P39086 KRT8P23-201ENST00000560090 1207 ntBASIC17.54■□□□□ 0.4
GRIK1P39086 LINC01225-203ENST00000563550 1244 ntBASIC17.54■□□□□ 0.4
GRIK1P39086 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
GRIK1P39086 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.54■□□□□ 0.4
GRIK1P39086 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.54■□□□□ 0.4
GRIK1P39086 AC027307.2-201ENST00000591252 911 ntBASIC17.54■□□□□ 0.4
GRIK1P39086 AC009093.7-201ENST00000623853 1223 ntBASIC17.54■□□□□ 0.4
GRIK1P39086 AC008267.7-201ENST00000624570 1194 ntBASIC17.54■□□□□ 0.4
GRIK1P39086 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.54■□□□□ 0.4
GRIK1P39086 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.54■□□□□ 0.4
GRIK1P39086 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GRIK1P39086 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GRIK1P39086 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.54■□□□□ 0.4
GRIK1P39086 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
GRIK1P39086 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.54■□□□□ 0.4
GRIK1P39086 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
GRIK1P39086 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GRIK1P39086 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.54■□□□□ 0.4
GRIK1P39086 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.54■□□□□ 0.4
GRIK1P39086 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.54■□□□□ 0.4
GRIK1P39086 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
GRIK1P39086 AC105020.1-201ENST00000435356 2205 ntBASIC17.53■□□□□ 0.4
GRIK1P39086 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GRIK1P39086 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GRIK1P39086 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GRIK1P39086 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms