Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
HTR1EP28566 AC132938.5-201ENST00000624980 1813 ntBASIC16.03■□□□□ 0.16
HTR1EP28566 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HTR1EP28566 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.03■□□□□ 0.16
HTR1EP28566 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HTR1EP28566 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HTR1EP28566 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HTR1EP28566 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HTR1EP28566 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.03■□□□□ 0.16
HTR1EP28566 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.03■□□□□ 0.16
HTR1EP28566 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.03■□□□□ 0.16
HTR1EP28566 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HTR1EP28566 AC027601.4-201ENST00000611259 610 ntBASIC16.03■□□□□ 0.16
HTR1EP28566 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HTR1EP28566 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.03■□□□□ 0.16
HTR1EP28566 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.03■□□□□ 0.16
HTR1EP28566 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.03■□□□□ 0.16
HTR1EP28566 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.03■□□□□ 0.16
HTR1EP28566 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HTR1EP28566 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HTR1EP28566 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HTR1EP28566 PAUPAR-201ENST00000630360 2965 ntBASIC16.03■□□□□ 0.16
HTR1EP28566 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
HTR1EP28566 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HTR1EP28566 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HTR1EP28566 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HTR1EP28566 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
HTR1EP28566 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HTR1EP28566 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HTR1EP28566 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HTR1EP28566 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
HTR1EP28566 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
HTR1EP28566 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.02■□□□□ 0.16
HTR1EP28566 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
HTR1EP28566 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
HTR1EP28566 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
HTR1EP28566 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.02■□□□□ 0.16
HTR1EP28566 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.02■□□□□ 0.16
HTR1EP28566 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HTR1EP28566 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
HTR1EP28566 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HTR1EP28566 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.02■□□□□ 0.16
HTR1EP28566 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HTR1EP28566 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.02■□□□□ 0.16
HTR1EP28566 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HTR1EP28566 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.02■□□□□ 0.16
HTR1EP28566 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HTR1EP28566 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HTR1EP28566 RCN1P2-201ENST00000398357 915 ntBASIC16.02■□□□□ 0.16
HTR1EP28566 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.02■□□□□ 0.16
HTR1EP28566 RBM17P3-201ENST00000417687 1192 ntBASIC16.02■□□□□ 0.16
HTR1EP28566 HMGN1P19-201ENST00000436976 333 ntBASIC16.02■□□□□ 0.16
HTR1EP28566 HNRNPDP1-201ENST00000439535 754 ntBASIC16.02■□□□□ 0.16
HTR1EP28566 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.02■□□□□ 0.16
HTR1EP28566 FGFR3P6-201ENST00000457012 610 ntBASIC16.02■□□□□ 0.16
HTR1EP28566 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.02■□□□□ 0.16
HTR1EP28566 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.02■□□□□ 0.16
HTR1EP28566 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.02■□□□□ 0.16
HTR1EP28566 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.02■□□□□ 0.16
HTR1EP28566 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.02■□□□□ 0.16
HTR1EP28566 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HTR1EP28566 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HTR1EP28566 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.02■□□□□ 0.16
HTR1EP28566 AC055717.3-201ENST00000622967 595 ntBASIC16.02■□□□□ 0.16
HTR1EP28566 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
HTR1EP28566 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.02■□□□□ 0.15
HTR1EP28566 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HTR1EP28566 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.02■□□□□ 0.15
HTR1EP28566 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
HTR1EP28566 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HTR1EP28566 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.02■□□□□ 0.15
HTR1EP28566 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
HTR1EP28566 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.02■□□□□ 0.15
HTR1EP28566 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HTR1EP28566 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.02■□□□□ 0.15
HTR1EP28566 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.02■□□□□ 0.15
HTR1EP28566 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HTR1EP28566 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HTR1EP28566 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HTR1EP28566 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
HTR1EP28566 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.01■□□□□ 0.15
HTR1EP28566 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.01■□□□□ 0.15
HTR1EP28566 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HTR1EP28566 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HTR1EP28566 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
HTR1EP28566 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
HTR1EP28566 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HTR1EP28566 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
HTR1EP28566 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.01■□□□□ 0.15
HTR1EP28566 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.01■□□□□ 0.15
HTR1EP28566 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.01■□□□□ 0.15
HTR1EP28566 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HTR1EP28566 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HTR1EP28566 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HTR1EP28566 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HTR1EP28566 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HTR1EP28566 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.01■□□□□ 0.15
HTR1EP28566 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.01■□□□□ 0.15
HTR1EP28566 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.01■□□□□ 0.15
HTR1EP28566 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms