Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 KRT18P27-201ENST00000427733 1299 ntBASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 AC008608.2-201ENST00000606089 416 ntBASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 AC020765.3-201ENST00000613051 740 ntBASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV5-3A0A0A0MS03 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 AL592424.1-201ENST00000563624 1536 ntBASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 MIR648-201ENST00000385046 94 ntBASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 LAGE3P1-201ENST00000425356 484 ntBASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 KRT18P31-201ENST00000506277 1292 ntBASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 AC021087.4-201ENST00000563761 564 ntBASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 REXO1L6P-202ENST00000619970 1078 ntBASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 AP001350.2-201ENST00000625104 1094 ntBASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 PGM5P2-202ENST00000637225 1043 ntBASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV5-3A0A0A0MS03 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV5-3A0A0A0MS03 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV5-3A0A0A0MS03 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV5-3A0A0A0MS03 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV5-3A0A0A0MS03 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV5-3A0A0A0MS03 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV5-3A0A0A0MS03 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV5-3A0A0A0MS03 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV5-3A0A0A0MS03 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.59■□□□□ 0.09
TRBV5-3A0A0A0MS03 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV5-3A0A0A0MS03 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.59■□□□□ 0.09
TRBV5-3A0A0A0MS03 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV5-3A0A0A0MS03 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV5-3A0A0A0MS03 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms