Protein–RNA interactions for Protein: Q9Y6X0

SETBP1, SET-binding protein, humanhuman

Predictions only

Length 1,596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETBP1Q9Y6X0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC34.45■■■■□ 3.1
SETBP1Q9Y6X0 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC34.44■■■■□ 3.1
SETBP1Q9Y6X0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC34.44■■■■□ 3.1
SETBP1Q9Y6X0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
SETBP1Q9Y6X0 AC142086.6-201ENST00000621154 1765 ntBASIC34.44■■■■□ 3.1
SETBP1Q9Y6X0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
SETBP1Q9Y6X0 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC34.43■■■■□ 3.1
SETBP1Q9Y6X0 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC34.43■■■■□ 3.1
SETBP1Q9Y6X0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC34.42■■■■□ 3.1
SETBP1Q9Y6X0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC34.42■■■■□ 3.1
SETBP1Q9Y6X0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
SETBP1Q9Y6X0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC34.41■■■■□ 3.1
SETBP1Q9Y6X0 AC120024.1-201ENST00000562672 995 ntBASIC34.41■■■■□ 3.1
SETBP1Q9Y6X0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC34.41■■■■□ 3.1
SETBP1Q9Y6X0 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC34.4■■■■□ 3.1
SETBP1Q9Y6X0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
SETBP1Q9Y6X0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC34.4■■■■□ 3.1
SETBP1Q9Y6X0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC34.4■■■■□ 3.1
SETBP1Q9Y6X0 MIR4281-201ENST00000580852 62 ntBASIC34.4■■■■□ 3.1
SETBP1Q9Y6X0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC34.4■■■■□ 3.1
SETBP1Q9Y6X0 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC34.4■■■■□ 3.1
SETBP1Q9Y6X0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC34.4■■■■□ 3.1
SETBP1Q9Y6X0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
SETBP1Q9Y6X0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC34.39■■■■□ 3.1
SETBP1Q9Y6X0 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
SETBP1Q9Y6X0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC34.39■■■■□ 3.1
SETBP1Q9Y6X0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC34.39■■■■□ 3.1
SETBP1Q9Y6X0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
SETBP1Q9Y6X0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC34.38■■■■□ 3.09
SETBP1Q9Y6X0 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC34.37■■■■□ 3.09
SETBP1Q9Y6X0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC34.37■■■■□ 3.09
SETBP1Q9Y6X0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC34.37■■■■□ 3.09
SETBP1Q9Y6X0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC34.36■■■■□ 3.09
SETBP1Q9Y6X0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC34.36■■■■□ 3.09
SETBP1Q9Y6X0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC34.35■■■■□ 3.09
SETBP1Q9Y6X0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC34.35■■■■□ 3.09
SETBP1Q9Y6X0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC34.35■■■■□ 3.09
SETBP1Q9Y6X0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
SETBP1Q9Y6X0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC34.34■■■■□ 3.09
SETBP1Q9Y6X0 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
SETBP1Q9Y6X0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC34.33■■■■□ 3.09
SETBP1Q9Y6X0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC34.33■■■■□ 3.09
SETBP1Q9Y6X0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC34.32■■■■□ 3.09
SETBP1Q9Y6X0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC34.32■■■■□ 3.09
SETBP1Q9Y6X0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC34.32■■■■□ 3.08
SETBP1Q9Y6X0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC34.32■■■■□ 3.08
SETBP1Q9Y6X0 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC34.31■■■■□ 3.08
SETBP1Q9Y6X0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC34.31■■■■□ 3.08
SETBP1Q9Y6X0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
SETBP1Q9Y6X0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC34.31■■■■□ 3.08
SETBP1Q9Y6X0 TSPY9P-201ENST00000440215 945 ntBASIC34.31■■■■□ 3.08
SETBP1Q9Y6X0 TSPY11P-201ENST00000442607 1045 ntBASIC34.31■■■■□ 3.08
SETBP1Q9Y6X0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC34.31■■■■□ 3.08
SETBP1Q9Y6X0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC34.31■■■■□ 3.08
SETBP1Q9Y6X0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC34.31■■■■□ 3.08
SETBP1Q9Y6X0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC34.3■■■■□ 3.08
SETBP1Q9Y6X0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
SETBP1Q9Y6X0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
SETBP1Q9Y6X0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
SETBP1Q9Y6X0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
SETBP1Q9Y6X0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC34.29■■■■□ 3.08
SETBP1Q9Y6X0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC34.29■■■■□ 3.08
SETBP1Q9Y6X0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
SETBP1Q9Y6X0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC34.28■■■■□ 3.08
SETBP1Q9Y6X0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC34.28■■■■□ 3.08
SETBP1Q9Y6X0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
SETBP1Q9Y6X0 AC092028.1-203ENST00000608262 953 ntBASIC34.28■■■■□ 3.08
SETBP1Q9Y6X0 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC34.28■■■■□ 3.08
SETBP1Q9Y6X0 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC34.28■■■■□ 3.08
SETBP1Q9Y6X0 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
SETBP1Q9Y6X0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
SETBP1Q9Y6X0 AL117332.1-201ENST00000622628 974 ntBASIC34.28■■■■□ 3.08
SETBP1Q9Y6X0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC34.27■■■■□ 3.08
SETBP1Q9Y6X0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
SETBP1Q9Y6X0 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
SETBP1Q9Y6X0 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
SETBP1Q9Y6X0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC34.26■■■■□ 3.07
SETBP1Q9Y6X0 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
SETBP1Q9Y6X0 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC34.26■■■■□ 3.07
SETBP1Q9Y6X0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC34.25■■■■□ 3.07
SETBP1Q9Y6X0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
SETBP1Q9Y6X0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
SETBP1Q9Y6X0 AP004609.3-201ENST00000610705 1884 ntBASIC34.24■■■■□ 3.07
SETBP1Q9Y6X0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
SETBP1Q9Y6X0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
SETBP1Q9Y6X0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
SETBP1Q9Y6X0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
SETBP1Q9Y6X0 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC34.23■■■■□ 3.07
SETBP1Q9Y6X0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC34.23■■■■□ 3.07
SETBP1Q9Y6X0 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC34.23■■■■□ 3.07
SETBP1Q9Y6X0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC34.23■■■■□ 3.07
SETBP1Q9Y6X0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC34.23■■■■□ 3.07
SETBP1Q9Y6X0 AL139246.5-201ENST00000606645 996 ntBASIC34.23■■■■□ 3.07
SETBP1Q9Y6X0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC34.23■■■■□ 3.07
SETBP1Q9Y6X0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
SETBP1Q9Y6X0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC34.22■■■■□ 3.07
SETBP1Q9Y6X0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
SETBP1Q9Y6X0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
SETBP1Q9Y6X0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
SETBP1Q9Y6X0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms