Protein–RNA interactions for Protein: Q9H2H0

CXXC4, CXXC-type zinc finger protein 4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4Q9H2H0 AL359504.2-201ENST00000605506 1601 ntBASIC20.88■□□□□ 0.93
CXXC4Q9H2H0 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CXXC4Q9H2H0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CXXC4Q9H2H0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CXXC4Q9H2H0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CXXC4Q9H2H0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.87■□□□□ 0.93
CXXC4Q9H2H0 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CXXC4Q9H2H0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CXXC4Q9H2H0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CXXC4Q9H2H0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CXXC4Q9H2H0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CXXC4Q9H2H0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CXXC4Q9H2H0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CXXC4Q9H2H0 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CXXC4Q9H2H0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
CXXC4Q9H2H0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CXXC4Q9H2H0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CXXC4Q9H2H0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CXXC4Q9H2H0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CXXC4Q9H2H0 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.85■□□□□ 0.93
CXXC4Q9H2H0 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CXXC4Q9H2H0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CXXC4Q9H2H0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.85■□□□□ 0.93
CXXC4Q9H2H0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CXXC4Q9H2H0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.85■□□□□ 0.93
CXXC4Q9H2H0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.85■□□□□ 0.93
CXXC4Q9H2H0 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CXXC4Q9H2H0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.84■□□□□ 0.93
CXXC4Q9H2H0 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CXXC4Q9H2H0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CXXC4Q9H2H0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
CXXC4Q9H2H0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CXXC4Q9H2H0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.84■□□□□ 0.93
CXXC4Q9H2H0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CXXC4Q9H2H0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.84■□□□□ 0.93
CXXC4Q9H2H0 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CXXC4Q9H2H0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.84■□□□□ 0.93
CXXC4Q9H2H0 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CXXC4Q9H2H0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CXXC4Q9H2H0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.83■□□□□ 0.93
CXXC4Q9H2H0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.83■□□□□ 0.93
CXXC4Q9H2H0 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.83■□□□□ 0.93
CXXC4Q9H2H0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.83■□□□□ 0.93
CXXC4Q9H2H0 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CXXC4Q9H2H0 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.83■□□□□ 0.92
CXXC4Q9H2H0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CXXC4Q9H2H0 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CXXC4Q9H2H0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.82■□□□□ 0.92
CXXC4Q9H2H0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CXXC4Q9H2H0 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CXXC4Q9H2H0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CXXC4Q9H2H0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CXXC4Q9H2H0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.81■□□□□ 0.92
CXXC4Q9H2H0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CXXC4Q9H2H0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.81■□□□□ 0.92
CXXC4Q9H2H0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CXXC4Q9H2H0 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CXXC4Q9H2H0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CXXC4Q9H2H0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CXXC4Q9H2H0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CXXC4Q9H2H0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CXXC4Q9H2H0 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CXXC4Q9H2H0 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CXXC4Q9H2H0 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CXXC4Q9H2H0 AL139246.5-201ENST00000606645 996 ntBASIC20.8■□□□□ 0.92
CXXC4Q9H2H0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CXXC4Q9H2H0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CXXC4Q9H2H0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CXXC4Q9H2H0 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
CXXC4Q9H2H0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CXXC4Q9H2H0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CXXC4Q9H2H0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CXXC4Q9H2H0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CXXC4Q9H2H0 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CXXC4Q9H2H0 LONRF2P2-201ENST00000439212 571 ntBASIC20.79■□□□□ 0.92
CXXC4Q9H2H0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.79■□□□□ 0.92
CXXC4Q9H2H0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.79■□□□□ 0.92
CXXC4Q9H2H0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CXXC4Q9H2H0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CXXC4Q9H2H0 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.78■□□□□ 0.92
CXXC4Q9H2H0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CXXC4Q9H2H0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
CXXC4Q9H2H0 KRT125P-201ENST00000546827 989 ntBASIC20.78■□□□□ 0.92
CXXC4Q9H2H0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.78■□□□□ 0.92
CXXC4Q9H2H0 AC087393.1-201ENST00000582896 145 ntBASIC20.78■□□□□ 0.92
CXXC4Q9H2H0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CXXC4Q9H2H0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CXXC4Q9H2H0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CXXC4Q9H2H0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.77■□□□□ 0.92
CXXC4Q9H2H0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.77■□□□□ 0.92
CXXC4Q9H2H0 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.77■□□□□ 0.92
CXXC4Q9H2H0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.77■□□□□ 0.92
CXXC4Q9H2H0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CXXC4Q9H2H0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.77■□□□□ 0.92
CXXC4Q9H2H0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXXC4Q9H2H0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXXC4Q9H2H0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXXC4Q9H2H0 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXXC4Q9H2H0 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXXC4Q9H2H0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms