Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.8■□□□□ 0.6
CHRDL1Q9BU40 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRDL1Q9BU40 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRDL1Q9BU40 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRDL1Q9BU40 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.79■□□□□ 0.6
CHRDL1Q9BU40 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRDL1Q9BU40 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRDL1Q9BU40 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CHRDL1Q9BU40 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHRDL1Q9BU40 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.79■□□□□ 0.6
CHRDL1Q9BU40 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRDL1Q9BU40 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRDL1Q9BU40 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHRDL1Q9BU40 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CHRDL1Q9BU40 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHRDL1Q9BU40 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRDL1Q9BU40 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRDL1Q9BU40 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRDL1Q9BU40 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.78■□□□□ 0.6
CHRDL1Q9BU40 AC022413.1-201ENST00000624602 984 ntBASIC18.78■□□□□ 0.6
CHRDL1Q9BU40 AC010501.1-201ENST00000606270 1962 ntBASIC18.78■□□□□ 0.6
CHRDL1Q9BU40 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRDL1Q9BU40 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRDL1Q9BU40 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRDL1Q9BU40 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHRDL1Q9BU40 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.77■□□□□ 0.6
CHRDL1Q9BU40 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.77■□□□□ 0.6
CHRDL1Q9BU40 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CHRDL1Q9BU40 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.77■□□□□ 0.6
CHRDL1Q9BU40 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHRDL1Q9BU40 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CHRDL1Q9BU40 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.77■□□□□ 0.59
CHRDL1Q9BU40 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHRDL1Q9BU40 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRDL1Q9BU40 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRDL1Q9BU40 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.76■□□□□ 0.59
CHRDL1Q9BU40 AC092296.2-201ENST00000589470 999 ntBASIC18.76■□□□□ 0.59
CHRDL1Q9BU40 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CHRDL1Q9BU40 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRDL1Q9BU40 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRDL1Q9BU40 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.75■□□□□ 0.59
CHRDL1Q9BU40 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRDL1Q9BU40 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.75■□□□□ 0.59
CHRDL1Q9BU40 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CHRDL1Q9BU40 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRDL1Q9BU40 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRDL1Q9BU40 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRDL1Q9BU40 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHRDL1Q9BU40 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHRDL1Q9BU40 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.75■□□□□ 0.59
CHRDL1Q9BU40 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CHRDL1Q9BU40 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.74■□□□□ 0.59
CHRDL1Q9BU40 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRDL1Q9BU40 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRDL1Q9BU40 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRDL1Q9BU40 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRDL1Q9BU40 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRDL1Q9BU40 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.74■□□□□ 0.59
CHRDL1Q9BU40 AC025884.2-201ENST00000553429 711 ntBASIC18.74■□□□□ 0.59
CHRDL1Q9BU40 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRDL1Q9BU40 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.74■□□□□ 0.59
CHRDL1Q9BU40 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHRDL1Q9BU40 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHRDL1Q9BU40 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRDL1Q9BU40 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRDL1Q9BU40 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.73■□□□□ 0.59
CHRDL1Q9BU40 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRDL1Q9BU40 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHRDL1Q9BU40 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHRDL1Q9BU40 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
CHRDL1Q9BU40 SMPD5-203ENST00000639008 1464 ntBASIC18.72■□□□□ 0.59
CHRDL1Q9BU40 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CHRDL1Q9BU40 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CHRDL1Q9BU40 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHRDL1Q9BU40 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.72■□□□□ 0.59
CHRDL1Q9BU40 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.72■□□□□ 0.59
CHRDL1Q9BU40 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHRDL1Q9BU40 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CHRDL1Q9BU40 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHRDL1Q9BU40 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CHRDL1Q9BU40 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHRDL1Q9BU40 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRDL1Q9BU40 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHRDL1Q9BU40 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.71■□□□□ 0.59
CHRDL1Q9BU40 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRDL1Q9BU40 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRDL1Q9BU40 ECEL1P2-201ENST00000461596 1295 ntBASIC18.7■□□□□ 0.58
CHRDL1Q9BU40 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRDL1Q9BU40 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CHRDL1Q9BU40 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.7■□□□□ 0.58
CHRDL1Q9BU40 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRDL1Q9BU40 AC096887.2-201ENST00000623443 1957 ntBASIC18.7■□□□□ 0.58
CHRDL1Q9BU40 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRDL1Q9BU40 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRDL1Q9BU40 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.69■□□□□ 0.58
CHRDL1Q9BU40 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.69■□□□□ 0.58
CHRDL1Q9BU40 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CHRDL1Q9BU40 GPX1-201ENST00000419349 1106 ntBASIC18.69■□□□□ 0.58
CHRDL1Q9BU40 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHRDL1Q9BU40 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms