Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC29.97■■■□□ 2.39
DDX60Q8IY21 MIR4281-201ENST00000580852 62 ntBASIC29.97■■■□□ 2.39
DDX60Q8IY21 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
DDX60Q8IY21 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
DDX60Q8IY21 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC29.97■■■□□ 2.39
DDX60Q8IY21 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
DDX60Q8IY21 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
DDX60Q8IY21 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC29.96■■■□□ 2.39
DDX60Q8IY21 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC29.96■■■□□ 2.39
DDX60Q8IY21 BX664725.1-201ENST00000438252 379 ntBASIC29.96■■■□□ 2.39
DDX60Q8IY21 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC29.96■■■□□ 2.39
DDX60Q8IY21 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
DDX60Q8IY21 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC29.96■■■□□ 2.39
DDX60Q8IY21 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC29.96■■■□□ 2.39
DDX60Q8IY21 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
DDX60Q8IY21 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
DDX60Q8IY21 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC29.95■■■□□ 2.39
DDX60Q8IY21 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.38
DDX60Q8IY21 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC29.94■■■□□ 2.38
DDX60Q8IY21 GRAMD4P7-201ENST00000578182 1232 ntBASIC29.94■■■□□ 2.38
DDX60Q8IY21 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC29.94■■■□□ 2.38
DDX60Q8IY21 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC29.94■■■□□ 2.38
DDX60Q8IY21 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC29.94■■■□□ 2.38
DDX60Q8IY21 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
DDX60Q8IY21 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC29.94■■■□□ 2.38
DDX60Q8IY21 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC29.94■■■□□ 2.38
DDX60Q8IY21 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
DDX60Q8IY21 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
DDX60Q8IY21 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
DDX60Q8IY21 UNC93B8-201ENST00000511903 705 ntBASIC29.93■■■□□ 2.38
DDX60Q8IY21 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC29.93■■■□□ 2.38
DDX60Q8IY21 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
DDX60Q8IY21 KRT18P24-201ENST00000344739 1156 ntBASIC29.93■■■□□ 2.38
DDX60Q8IY21 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC29.93■■■□□ 2.38
DDX60Q8IY21 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC29.93■■■□□ 2.38
DDX60Q8IY21 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC29.92■■■□□ 2.38
DDX60Q8IY21 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
DDX60Q8IY21 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
DDX60Q8IY21 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC29.92■■■□□ 2.38
DDX60Q8IY21 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
DDX60Q8IY21 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC29.91■■■□□ 2.38
DDX60Q8IY21 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC29.91■■■□□ 2.38
DDX60Q8IY21 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC29.91■■■□□ 2.38
DDX60Q8IY21 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
DDX60Q8IY21 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC29.91■■■□□ 2.38
DDX60Q8IY21 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
DDX60Q8IY21 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC29.9■■■□□ 2.38
DDX60Q8IY21 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
DDX60Q8IY21 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC29.9■■■□□ 2.38
DDX60Q8IY21 MIR4787-201ENST00000607364 84 ntBASIC29.9■■■□□ 2.38
DDX60Q8IY21 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC29.89■■■□□ 2.38
DDX60Q8IY21 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
DDX60Q8IY21 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
DDX60Q8IY21 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC29.89■■■□□ 2.38
DDX60Q8IY21 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.38
DDX60Q8IY21 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
DDX60Q8IY21 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.37
DDX60Q8IY21 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
DDX60Q8IY21 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
DDX60Q8IY21 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC29.88■■■□□ 2.37
DDX60Q8IY21 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC29.88■■■□□ 2.37
DDX60Q8IY21 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
DDX60Q8IY21 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
DDX60Q8IY21 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
DDX60Q8IY21 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
DDX60Q8IY21 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC29.88■■■□□ 2.37
DDX60Q8IY21 AC120024.1-201ENST00000562672 995 ntBASIC29.87■■■□□ 2.37
DDX60Q8IY21 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC29.87■■■□□ 2.37
DDX60Q8IY21 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC29.87■■■□□ 2.37
DDX60Q8IY21 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
DDX60Q8IY21 KRT16P3-201ENST00000439127 1283 ntBASIC29.86■■■□□ 2.37
DDX60Q8IY21 AC137630.3-201ENST00000607245 391 ntBASIC29.86■■■□□ 2.37
DDX60Q8IY21 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
DDX60Q8IY21 MTURN-203ENST00000409688 843 ntTSL 2 BASIC29.85■■■□□ 2.37
DDX60Q8IY21 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC29.85■■■□□ 2.37
DDX60Q8IY21 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC29.84■■■□□ 2.37
DDX60Q8IY21 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC29.84■■■□□ 2.37
DDX60Q8IY21 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
DDX60Q8IY21 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
DDX60Q8IY21 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
DDX60Q8IY21 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
DDX60Q8IY21 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
DDX60Q8IY21 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
DDX60Q8IY21 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
DDX60Q8IY21 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
DDX60Q8IY21 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
DDX60Q8IY21 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC29.83■■■□□ 2.37
DDX60Q8IY21 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC29.83■■■□□ 2.37
DDX60Q8IY21 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
DDX60Q8IY21 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC29.83■■■□□ 2.37
DDX60Q8IY21 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC29.82■■■□□ 2.36
DDX60Q8IY21 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
DDX60Q8IY21 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC29.82■■■□□ 2.36
DDX60Q8IY21 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
DDX60Q8IY21 KRT125P-201ENST00000546827 989 ntBASIC29.82■■■□□ 2.36
DDX60Q8IY21 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
DDX60Q8IY21 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
DDX60Q8IY21 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
DDX60Q8IY21 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC29.81■■■□□ 2.36
DDX60Q8IY21 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms