Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 WDR74-215ENST00000544831 814 ntTSL 227.53■■■□□ 21e-6■■■■□ 22
PABPN1Q86U42 WDR74-214ENST00000543688 537 ntTSL 321.61■■□□□ 1.051e-6■■■■□ 22
PABPN1Q86U42 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.642e-7■■■■□ 22
PABPN1Q86U42 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.532e-7■■■■□ 22
PABPN1Q86U42 SEC31A-228ENST00000509142 3861 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.42e-7■■■■□ 22
PABPN1Q86U42 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.252e-7■■■■□ 22
PABPN1Q86U42 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC14.04□□□□□ -0.162e-7■■■■□ 22
PABPN1Q86U42 SEC31A-213ENST00000503937 1564 ntTSL 1 (best)11.6□□□□□ -0.552e-7■■■■□ 22
PABPN1Q86U42 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC9.11□□□□□ -0.952e-7■■■■□ 22
PABPN1Q86U42 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC8.25□□□□□ -1.092e-7■■■■□ 22
PABPN1Q86U42 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.232e-7■■■■□ 22
PABPN1Q86U42 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC6.12□□□□□ -1.432e-7■■■■□ 22
PABPN1Q86U42 SFI1-206ENST00000417682 1817 ntTSL 530.58■■■□□ 2.491e-6■■■■□ 22
PABPN1Q86U42 SFI1-228ENST00000524296 2108 ntTSL 525.3■■□□□ 1.641e-6■■■■□ 22
PABPN1Q86U42 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.483e-6■■■■□ 22
PABPN1Q86U42 TBCD-206ENST00000571712 850 ntTSL 522.71■■□□□ 1.233e-6■■■■□ 22
PABPN1Q86U42 TBCD-219ENST00000576160 942 ntTSL 520.28■□□□□ 0.843e-6■■■■□ 22
PABPN1Q86U42 CDCA7-201ENST00000306721 2789 ntTSL 2 BASIC17.85■□□□□ 0.453e-6■■■■□ 22
PABPN1Q86U42 CDCA7-206ENST00000467411 3176 ntTSL 1 (best)17.75■□□□□ 0.433e-6■■■■□ 22
PABPN1Q86U42 FANCA-215ENST00000564475 732 ntAPPRIS ALT2 TSL 222.23■■□□□ 1.152e-7■■■■□ 21.9
PABPN1Q86U42 UNC13D-216ENST00000591616 659 ntTSL 333.72■■■□□ 2.991e-6■■■■□ 21.9
PABPN1Q86U42 HERC2P2-205ENST00000619021 5746 ntTSL 1 (best) BASIC14.46□□□□□ -0.091e-6■■■■□ 21.9
PABPN1Q86U42 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC43.11■■■■■ 4.492e-12■■■■□ 21.8
PABPN1Q86U42 SNRNP70-204ENST00000595231 1673 ntTSL 1 (best)43.05■■■■■ 4.482e-12■■■■□ 21.8
PABPN1Q86U42 SNRNP70-209ENST00000601065 1757 ntTSL 340.78■■■■■ 4.122e-12■■■■□ 21.8
PABPN1Q86U42 SNRNP70-202ENST00000401730 3144 ntTSL 226.65■■□□□ 1.862e-12■■■■□ 21.8
PABPN1Q86U42 SNRNP70-203ENST00000544278 3221 ntTSL 1 (best)25.59■■□□□ 1.692e-12■■■■□ 21.8
PABPN1Q86U42 ZC3H18-205ENST00000564341 387 ntTSL 528.94■■■□□ 2.225e-10■■■■□ 21.8
PABPN1Q86U42 ZC3H18-206ENST00000565583 1068 ntTSL 227.1■■□□□ 1.935e-10■■■■□ 21.8
PABPN1Q86U42 ZC3H18-208ENST00000566496 1949 ntTSL 222.56■■□□□ 1.25e-10■■■■□ 21.8
PABPN1Q86U42 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.025e-10■■■■□ 21.8
PABPN1Q86U42 MST1-217ENST00000493836 923 ntTSL 227.65■■■□□ 2.022e-14■■■■□ 21.8
PABPN1Q86U42 SLC35C2-207ENST00000480329 919 ntTSL 233.55■■■□□ 2.962e-6■■■■□ 21.8
PABPN1Q86U42 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.291e-7■■■■□ 21.8
PABPN1Q86U42 FANCA-230ENST00000568369 4601 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -01e-7■■■■□ 21.8
PABPN1Q86U42 INPPL1-212ENST00000541752 856 ntTSL 230.57■■■□□ 2.485e-7■■■■□ 21.8
PABPN1Q86U42 CHRD-213ENST00000482014 560 ntTSL 434.75■■■■□ 3.153e-7■■■■□ 21.7
PABPN1Q86U42 INF2-201ENST00000252527 3050 ntTSL 222.79■■□□□ 1.247e-7■■■■□ 21.7
PABPN1Q86U42 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC22.2■■□□□ 1.147e-7■■■■□ 21.7
PABPN1Q86U42 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.057e-7■■■■□ 21.7
PABPN1Q86U42 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.557e-7■■■■□ 21.7
PABPN1Q86U42 ACAP3-204ENST00000379037 492 ntTSL 333.47■■■□□ 2.952e-8■■■■□ 21.7
PABPN1Q86U42 ABCA7-206ENST00000525073 1918 ntTSL 236.06■■■■□ 3.364e-7■■■■□ 21.7
PABPN1Q86U42 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.617e-7■■■■□ 21.7
PABPN1Q86U42 UBE2D2-208ENST00000511725 656 ntTSL 2 BASIC20.29■□□□□ 0.843e-6■■■■□ 21.7
PABPN1Q86U42 NADSYN1-211ENST00000527963 479 ntTSL 422.97■■□□□ 1.273e-7■■■■□ 21.7
PABPN1Q86U42 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC43.94■■■■■ 4.623e-7■■■■□ 21.7
PABPN1Q86U42 HSF4-214ENST00000521314 1555 ntTSL 543.16■■■■■ 4.53e-7■■■■□ 21.7
PABPN1Q86U42 HSF4-203ENST00000517685 1249 ntTSL 542.74■■■■■ 4.433e-7■■■■□ 21.7
PABPN1Q86U42 HSF4-220ENST00000522295 1539 ntTSL 541.88■■■■■ 4.293e-7■■■■□ 21.7
PABPN1Q86U42 HSF4-201ENST00000434833 1568 ntTSL 1 (best)41.45■■■■■ 4.233e-7■■■■□ 21.7
PABPN1Q86U42 HSF4-224ENST00000523562 1839 ntTSL 240.53■■■■■ 4.083e-7■■■■□ 21.7
PABPN1Q86U42 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC40.3■■■■■ 4.043e-7■■■■□ 21.7
PABPN1Q86U42 HSF4-216ENST00000521624 1358 ntTSL 1 (best)39.73■■■■□ 3.953e-7■■■■□ 21.7
PABPN1Q86U42 HSF4-213ENST00000520833 1065 ntTSL 334.45■■■■□ 3.113e-7■■■■□ 21.7
PABPN1Q86U42 HSF4-209ENST00000519601 669 ntTSL 330.07■■■□□ 2.43e-7■■■■□ 21.7
PABPN1Q86U42 HSF4-211ENST00000520304 565 ntTSL 528.82■■■□□ 2.23e-7■■■■□ 21.7
PABPN1Q86U42 HSF4-212ENST00000520528 717 ntTSL 326.56■■□□□ 1.843e-7■■■■□ 21.7
PABPN1Q86U42 FANCA-201ENST00000305699 1430 ntTSL 231.87■■■□□ 2.691e-7■■■■□ 21.6
PABPN1Q86U42 RNF123-205ENST00000444689 442 ntTSL 327.22■■□□□ 1.958e-11■■■■□ 21.6
PABPN1Q86U42 PELP1-214ENST00000575329 3280 ntTSL 223.87■■□□□ 1.411e-6■■■■□ 21.6
PABPN1Q86U42 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.091e-6■■■■□ 21.6
PABPN1Q86U42 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.931e-6■■■■□ 21.6
PABPN1Q86U42 PELP1-211ENST00000573523 3878 ntTSL 220.66■□□□□ 0.91e-6■■■■□ 21.6
PABPN1Q86U42 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.881e-6■■■■□ 21.6
PABPN1Q86U42 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC20.04■□□□□ 0.81e-6■■■■□ 21.6
PABPN1Q86U42 STXBP2-214ENST00000599400 811 ntTSL 530.8■■■□□ 2.524e-7■■■■□ 21.6
PABPN1Q86U42 STXBP2-219ENST00000600702 770 ntTSL 227.94■■■□□ 2.064e-7■■■■□ 21.6
PABPN1Q86U42 AP1G2-214ENST00000554892 658 ntTSL 220.99■□□□□ 0.953e-16■■■■□ 21.6
PABPN1Q86U42 SKIV2L-211ENST00000485349 734 ntTSL 235.44■■■■□ 3.263e-6■■■■□ 21.5
PABPN1Q86U42 MYO18A-212ENST00000531892 599 ntTSL 323.25■■□□□ 1.314e-11■■■■□ 21.5
PABPN1Q86U42 MYO18A-211ENST00000531438 565 ntTSL 421.16■□□□□ 0.984e-11■■■■□ 21.5
PABPN1Q86U42 DPH1-207ENST00000571710 2013 ntTSL 1 (best)39.02■■■■□ 3.842e-11■■■■□ 21.5
PABPN1Q86U42 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC33.51■■■□□ 2.952e-11■■■■□ 21.5
PABPN1Q86U42 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.92e-11■■■■□ 21.5
PABPN1Q86U42 DPH1-205ENST00000570867 2265 ntTSL 233.16■■■□□ 2.92e-11■■■■□ 21.5
PABPN1Q86U42 DPH1-217ENST00000607788 775 ntTSL 533.08■■■□□ 2.892e-11■■■■□ 21.5
PABPN1Q86U42 DPH1-210ENST00000572684 2607 ntTSL 229.86■■■□□ 2.372e-11■■■■□ 21.5
PABPN1Q86U42 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC45.4■■■■■ 4.862e-12■■■■□ 21.5
PABPN1Q86U42 ACAP3-209ENST00000476572 819 ntTSL 532.13■■■□□ 2.731e-7■■■■□ 21.5
PABPN1Q86U42 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC32.44■■■□□ 2.785e-7■■■■□ 21.5
PABPN1Q86U42 RAB11FIP3-203ENST00000434585 3550 ntAPPRIS ALT2 TSL 519.38■□□□□ 0.695e-7■■■■□ 21.5
PABPN1Q86U42 RAB11FIP3-205ENST00000450428 3203 ntTSL 2 BASIC18.76■□□□□ 0.595e-7■■■■□ 21.5
PABPN1Q86U42 KNTC1-211ENST00000541427 641 ntTSL 213.91□□□□□ -0.184e-7■■■■□ 21.5
PABPN1Q86U42 PNCK-231ENST00000488994 1437 ntTSL 235.12■■■■□ 3.212e-6■■■■□ 21.5
PABPN1Q86U42 PCED1A-205ENST00000474714 531 ntTSL 328.36■■■□□ 2.138e-7■■■■□ 21.5
PABPN1Q86U42 PPP1R12C-205ENST00000588277 419 ntTSL 339.41■■■■□ 3.97e-8■■■■□ 21.4
PABPN1Q86U42 RNF123-212ENST00000497099 606 ntTSL 238.63■■■■□ 3.778e-7■■■■□ 21.4
PABPN1Q86U42 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.512e-20■■■■□ 21.4
PABPN1Q86U42 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC31.47■■■□□ 2.632e-20■■■■□ 21.4
PABPN1Q86U42 RNF123-213ENST00000498376 746 ntTSL 318.8■□□□□ 0.68e-7■■■■□ 21.4
PABPN1Q86U42 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC51.05■■■■■ 5.763e-7■■■■□ 21.4
PABPN1Q86U42 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC50.18■■■■■ 5.623e-7■■■■□ 21.4
PABPN1Q86U42 MXD3-206ENST00000503782 1854 ntTSL 247.63■■■■■ 5.223e-7■■■■□ 21.4
PABPN1Q86U42 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC44.8■■■■■ 4.763e-7■■■■□ 21.4
PABPN1Q86U42 MXD3-205ENST00000503473 2279 ntTSL 538.09■■■■□ 3.693e-7■■■■□ 21.4
PABPN1Q86U42 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC30.9■■■□□ 2.543e-7■■■■□ 21.4
PABPN1Q86U42 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.95e-7■■■■□ 21.4
PABPN1Q86U42 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.885e-7■■■■□ 21.4
PABPN1Q86U42 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.825e-7■■■■□ 21.4
Retrieved 100 of 8,254 protein–RNA pairs in 134 ms