RNA–Protein interactions for RNA: ENST00000305699.15

FANCA-201, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-201ENST00000305699 NISCHQ9Y2I1 1504 aa38.53■■■■□ 3.76
FANCA-201ENST00000305699 CCDC180Q9P1Z9 1646 aa34.45■■■■□ 3.11
FANCA-201ENST00000305699 ABCC9O60706 1549 aa34.18■■■■□ 3.06
FANCA-201ENST00000305699 RB1CC1Q8TDY2 1594 aa32.65■■■□□ 2.82
FANCA-201ENST00000305699 DCAF8L2P0C7V8 631 aa32.49■■■□□ 2.79
FANCA-201ENST00000305699 NACADO15069 1562 aa32.49■■■□□ 2.79
FANCA-201ENST00000305699 MYO15BQ96JP2 1530 aa32.1■■■□□ 2.73
FANCA-201ENST00000305699 ZCCHC6Q5VYS8 1495 aaKnown RBP31.99■■■□□ 2.71
FANCA-201ENST00000305699 UNC13AQ9UPW8 1703 aa31.91■■■□□ 2.7
FANCA-201ENST00000305699 PABPN1Q86U42 306 aaKnown RBP eCLIP31.87■■■□□ 2.691e-7■■■■□ 21.6
FANCA-201ENST00000305699 DCAF1Q9Y4B6 1507 aa31.81■■■□□ 2.68
FANCA-201ENST00000305699 DNAJC5BQ9UF47 199 aa31.74■■■□□ 2.67
FANCA-201ENST00000305699 BICRAQ9NZM4 1560 aa31.65■■■□□ 2.66
FANCA-201ENST00000305699 SCRIBQ14160 1630 aa31.45■■■□□ 2.63
FANCA-201ENST00000305699 SHROOM4Q9ULL8 1493 aa31.26■■■□□ 2.59
FANCA-201ENST00000305699 EIF4G1Q04637 1599 aaKnown RBP30.88■■■□□ 2.53
FANCA-201ENST00000305699 CC2D2AQ9P2K1 1620 aa30.88■■■□□ 2.53
FANCA-201ENST00000305699 CECR2Q9BXF3 1484 aa30.75■■■□□ 2.51
FANCA-201ENST00000305699 SMARCA4P51532 1647 aa30■■■□□ 2.39
FANCA-201ENST00000305699 NCAPD3P42695 1498 aa29.97■■■□□ 2.39
FANCA-201ENST00000305699 ATAD2BQ9ULI0 1458 aa29.94■■■□□ 2.38
FANCA-201ENST00000305699 BAZ1AQ9NRL2 1556 aaPredicted RBP29.9■■■□□ 2.38
FANCA-201ENST00000305699 SMARCA2P51531 1590 aa29.89■■■□□ 2.38
FANCA-201ENST00000305699 HMGXB3Q12766 1538 aa29.8■■■□□ 2.36
FANCA-201ENST00000305699 BAZ1BQ9UIG0 1483 aaKnown RBP29.71■■■□□ 2.35
FANCA-201ENST00000305699 MROH2BQ7Z745 1585 aa29.7■■■□□ 2.34
FANCA-201ENST00000305699 PEG3Q9GZU2 1588 aa29.67■■■□□ 2.34
FANCA-201ENST00000305699 ERCC6Q03468 1493 aa29.52■■■□□ 2.32
FANCA-201ENST00000305699 NESP48681 1621 aa29.44■■■□□ 2.3
FANCA-201ENST00000305699 WIZO95785 1651 aa29.37■■■□□ 2.29
FANCA-201ENST00000305699 CUX2O14529 1486 aa29.3■■■□□ 2.28
FANCA-201ENST00000305699 LAMC3Q9Y6N6 1575 aa29.27■■■□□ 2.28
FANCA-201ENST00000305699 RSF1Q96T23 1441 aaPredicted RBP29.19■■■□□ 2.26
FANCA-201ENST00000305699 PDS5BQ9NTI5 1447 aa29.11■■■□□ 2.25
FANCA-201ENST00000305699 CADPSQ9ULU8 1353 aa29.1■■■□□ 2.25
FANCA-201ENST00000305699 KIF21AQ7Z4S6 1674 aa29.08■■■□□ 2.25
FANCA-201ENST00000305699 THOC2Q8NI27 1593 aaKnown RBP29.06■■■□□ 2.24
FANCA-201ENST00000305699 TOP2AP11388 1531 aaKnown RBP29.02■■■□□ 2.24
FANCA-201ENST00000305699 DNAJC5Q9H3Z4 198 aa28.92■■■□□ 2.22
FANCA-201ENST00000305699 MRC2Q9UBG0 1479 aa28.83■■■□□ 2.21
FANCA-201ENST00000305699 CFTRP13569 1480 aa28.82■■■□□ 2.2
FANCA-201ENST00000305699 CEP164Q9UPV0 1460 aa28.79■■■□□ 2.2
FANCA-201ENST00000305699 FANCD2Q9BXW9 1451 aa28.78■■■□□ 2.2
FANCA-201ENST00000305699 WDR62O43379 1518 aa28.73■■■□□ 2.19
FANCA-201ENST00000305699 CCDC88BA6NC98 1476 aa28.69■■■□□ 2.18
FANCA-201ENST00000305699 PRDM2Q13029 1718 aa28.59■■■□□ 2.17
FANCA-201ENST00000305699 URB2Q14146 1524 aaKnown RBP28.51■■■□□ 2.15
FANCA-201ENST00000305699 TOPBP1Q92547 1522 aa28.27■■■□□ 2.12
FANCA-201ENST00000305699 ABCC8Q09428 1581 aa28.23■■■□□ 2.11
FANCA-201ENST00000305699 SUPT5HO00267 1087 aaKnown RBP28.22■■■□□ 2.11
FANCA-201ENST00000305699 IFT140Q96RY7 1462 aa28.2■■■□□ 2.1
FANCA-201ENST00000305699 DNMBPQ6XZF7 1577 aa28.2■■■□□ 2.1
FANCA-201ENST00000305699 ZNF608Q9ULD9 1512 aaPredicted RBP28.11■■■□□ 2.09
FANCA-201ENST00000305699 OSCARQ8IYS5 282 aa28.04■■■□□ 2.08
FANCA-201ENST00000305699 POLA1P09884 1462 aaPredicted RBP28■■■□□ 2.07
FANCA-201ENST00000305699 EIF4G3O43432 1585 aaKnown RBP27.99■■■□□ 2.07
FANCA-201ENST00000305699 TARBP1Q13395 1621 aaKnown RBP27.97■■■□□ 2.07
FANCA-201ENST00000305699 AQRO60306 1485 aaKnown RBP eCLIP27.91■■■□□ 2.061e-6■■■■■ 28.6
FANCA-201ENST00000305699 RAD54L2Q9Y4B4 1467 aa27.9■■■□□ 2.06
FANCA-201ENST00000305699 SOGA1O94964 1423 aa27.89■■■□□ 2.06
FANCA-201ENST00000305699 CUX1P39880 1505 aa27.89■■■□□ 2.05
FANCA-201ENST00000305699 FGD5Q6ZNL6 1462 aa27.88■■■□□ 2.05
FANCA-201ENST00000305699 TRIM41Q8WV44 630 aa27.87■■■□□ 2.05
FANCA-201ENST00000305699 TDRD9Q8NDG6 1382 aaKnown RBP27.8■■■□□ 2.04
FANCA-201ENST00000305699 FBLN2P98095 1184 aa27.74■■■□□ 2.03
FANCA-201ENST00000305699 CHD1O14646 1710 aa27.74■■■□□ 2.03
FANCA-201ENST00000305699 WDR97A6NE52 1622 aa27.71■■■□□ 2.03
FANCA-201ENST00000305699 SNAPC4Q5SXM2 1469 aa27.65■■■□□ 2.02
FANCA-201ENST00000305699 RIMBP3CA6NJZ7 1639 aa27.64■■■□□ 2.02
FANCA-201ENST00000305699 RIMBP3BA6NNM3 1639 aa27.64■■■□□ 2.02
FANCA-201ENST00000305699 RIMBP3Q9UFD9 1639 aa27.64■■■□□ 2.02
FANCA-201ENST00000305699 GRIN2BQ13224 1484 aa27.6■■■□□ 2.01
FANCA-201ENST00000305699 ARHGEF11O15085 1522 aa27.57■■■□□ 2
FANCA-201ENST00000305699 MAGI1Q96QZ7 1491 aaPredicted RBP27.57■■■□□ 2
FANCA-201ENST00000305699 WRNQ14191 1432 aaPredicted RBP eCLIP27.56■■■□□ 2
FANCA-201ENST00000305699 ABCA10Q8WWZ4 1543 aa27.56■■■□□ 2
FANCA-201ENST00000305699 GAPVD1Q14C86 1478 aa27.56■■■□□ 2
FANCA-201ENST00000305699 CHMP7Q8WUX9 453 aaPredicted RBP27.55■■■□□ 2
FANCA-201ENST00000305699 PBRM1Q86U86 1689 aa27.54■■■□□ 2
FANCA-201ENST00000305699 TOP2BQ02880 1626 aa27.53■■■□□ 2
FANCA-201ENST00000305699 BIVM-ERCC5R4GMW8 1640 aa27.53■■■□□ 2
FANCA-201ENST00000305699 SYNJ1O43426 1573 aa27.51■■□□□ 1.99
FANCA-201ENST00000305699 ABCA5Q8WWZ7 1642 aa27.49■■□□□ 1.99
FANCA-201ENST00000305699 SYNJ2O15056 1496 aa27.48■■□□□ 1.99
FANCA-201ENST00000305699 CYB5RLQ6IPT4 315 aa27.39■■□□□ 1.97
FANCA-201ENST00000305699 CLASP1Q7Z460 1538 aa27.39■■□□□ 1.97
FANCA-201ENST00000305699 ARAP1Q96P48 1450 aa27.32■■□□□ 1.96
FANCA-201ENST00000305699 ADAMTS12P58397 1594 aa27.28■■□□□ 1.96
FANCA-201ENST00000305699 GRIN2AQ12879 1464 aa27.25■■□□□ 1.95
FANCA-201ENST00000305699 ERICH3Q5RHP9 1530 aa27.22■■□□□ 1.95
FANCA-201ENST00000305699 FHAD1B1AJZ9 1412 aa27.21■■□□□ 1.95
FANCA-201ENST00000305699 CEP170Q5SW79 1584 aa27.13■■□□□ 1.93
FANCA-201ENST00000305699 NUP160Q12769 1436 aa27.11■■□□□ 1.93
FANCA-201ENST00000305699 KIF27Q86VH2 1401 aa27.03■■□□□ 1.92
FANCA-201ENST00000305699 TRHP20396 242 aaPredicted RBP27.02■■□□□ 1.92
FANCA-201ENST00000305699 ERCC6L2Q5T890 1561 aa27■■□□□ 1.91
FANCA-201ENST00000305699 SHROOM2Q13796 1616 aa26.97■■□□□ 1.91
FANCA-201ENST00000305699 IGF1RP08069 1367 aa26.94■■□□□ 1.9
FANCA-201ENST00000305699 CUL7Q14999 1698 aa26.91■■□□□ 1.9
FANCA-201ENST00000305699 RUSC2Q8N2Y8 1516 aa26.89■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms