Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RNF180Q86T96 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
RNF180Q86T96 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RNF180Q86T96 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RNF180Q86T96 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.83■■□□□ 1.89
RNF180Q86T96 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.83■■□□□ 1.89
RNF180Q86T96 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
RNF180Q86T96 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.83■■□□□ 1.89
RNF180Q86T96 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.83■■□□□ 1.89
RNF180Q86T96 AC010997.5-201ENST00000609182 354 ntBASIC26.83■■□□□ 1.89
RNF180Q86T96 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.83■■□□□ 1.89
RNF180Q86T96 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RNF180Q86T96 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
RNF180Q86T96 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.83■■□□□ 1.89
RNF180Q86T96 AL117332.1-201ENST00000622628 974 ntBASIC26.82■■□□□ 1.88
RNF180Q86T96 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.82■■□□□ 1.88
RNF180Q86T96 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
RNF180Q86T96 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.81■■□□□ 1.88
RNF180Q86T96 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
RNF180Q86T96 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RNF180Q86T96 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
RNF180Q86T96 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.81■■□□□ 1.88
RNF180Q86T96 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.81■■□□□ 1.88
RNF180Q86T96 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RNF180Q86T96 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
RNF180Q86T96 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RNF180Q86T96 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC26.8■■□□□ 1.88
RNF180Q86T96 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.8■■□□□ 1.88
RNF180Q86T96 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.8■■□□□ 1.88
RNF180Q86T96 MIR6724-1-201ENST00000616420 92 ntBASIC26.8■■□□□ 1.88
RNF180Q86T96 MIR6724-2-201ENST00000616483 92 ntBASIC26.8■■□□□ 1.88
RNF180Q86T96 MIR6724-4-201ENST00000617390 92 ntBASIC26.8■■□□□ 1.88
RNF180Q86T96 MIR6724-3-201ENST00000622482 92 ntBASIC26.8■■□□□ 1.88
RNF180Q86T96 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.8■■□□□ 1.88
RNF180Q86T96 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
RNF180Q86T96 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.8■■□□□ 1.88
RNF180Q86T96 LINC01003-201ENST00000564834 1764 ntBASIC26.79■■□□□ 1.88
RNF180Q86T96 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.79■■□□□ 1.88
RNF180Q86T96 MIR3621-201ENST00000580529 85 ntBASIC26.79■■□□□ 1.88
RNF180Q86T96 MTDHP2-201ENST00000601468 714 ntBASIC26.79■■□□□ 1.88
RNF180Q86T96 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
RNF180Q86T96 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
RNF180Q86T96 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
RNF180Q86T96 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
RNF180Q86T96 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.78■■□□□ 1.88
RNF180Q86T96 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.78■■□□□ 1.88
RNF180Q86T96 DRD5P2-201ENST00000421395 2012 ntBASIC26.78■■□□□ 1.88
RNF180Q86T96 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RNF180Q86T96 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.77■■□□□ 1.88
RNF180Q86T96 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.77■■□□□ 1.88
RNF180Q86T96 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.77■■□□□ 1.88
RNF180Q86T96 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RNF180Q86T96 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RNF180Q86T96 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RNF180Q86T96 AC142472.1-201ENST00000612013 1741 ntBASIC26.76■■□□□ 1.88
RNF180Q86T96 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
RNF180Q86T96 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC26.76■■□□□ 1.87
RNF180Q86T96 AL356740.2-201ENST00000601559 647 ntBASIC26.76■■□□□ 1.87
RNF180Q86T96 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.75■■□□□ 1.87
RNF180Q86T96 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
RNF180Q86T96 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.75■■□□□ 1.87
RNF180Q86T96 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
RNF180Q86T96 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
RNF180Q86T96 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.75■■□□□ 1.87
RNF180Q86T96 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.75■■□□□ 1.87
RNF180Q86T96 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RNF180Q86T96 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.74■■□□□ 1.87
RNF180Q86T96 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RNF180Q86T96 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RNF180Q86T96 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
RNF180Q86T96 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.74■■□□□ 1.87
RNF180Q86T96 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.74■■□□□ 1.87
RNF180Q86T96 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
RNF180Q86T96 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
RNF180Q86T96 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
RNF180Q86T96 AC011551.1-201ENST00000614101 683 ntBASIC26.73■■□□□ 1.87
RNF180Q86T96 AC110285.6-201ENST00000617652 491 ntBASIC26.73■■□□□ 1.87
RNF180Q86T96 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
RNF180Q86T96 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
RNF180Q86T96 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.72■■□□□ 1.87
RNF180Q86T96 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.72■■□□□ 1.87
RNF180Q86T96 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RNF180Q86T96 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.72■■□□□ 1.87
RNF180Q86T96 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26.72■■□□□ 1.87
RNF180Q86T96 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RNF180Q86T96 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RNF180Q86T96 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
RNF180Q86T96 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.71■■□□□ 1.87
RNF180Q86T96 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RNF180Q86T96 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.71■■□□□ 1.87
RNF180Q86T96 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
RNF180Q86T96 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.71■■□□□ 1.87
RNF180Q86T96 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.71■■□□□ 1.87
RNF180Q86T96 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
RNF180Q86T96 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
RNF180Q86T96 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.7■■□□□ 1.86
RNF180Q86T96 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.7■■□□□ 1.86
RNF180Q86T96 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RNF180Q86T96 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
RNF180Q86T96 AC096631.2-201ENST00000436136 790 ntBASIC26.69■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms