Protein–RNA interactions for Protein: Q4G0J3

LARP7, La-related protein 7, humanhuman

Known RBP eCLIP

Length 582 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP7Q4G0J3 PLEC-204ENST00000354958 14751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.491e-7■■□□□ 12.2
LARP7Q4G0J3 PLEC-206ENST00000357649 14689 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.511e-7■■□□□ 12.2
LARP7Q4G0J3 PLEC-203ENST00000354589 14736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.521e-7■■□□□ 12.2
LARP7Q4G0J3 PLEC-205ENST00000356346 14683 ntTSL 1 (best) BASIC11.78□□□□□ -0.521e-7■■□□□ 12.2
LARP7Q4G0J3 PLEC-207ENST00000398774 14646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.61e-7■■□□□ 12.2
LARP7Q4G0J3 PTBP1-213ENST00000587191 357 ntTSL 511.18□□□□□ -0.623e-6■■□□□ 12.2
LARP7Q4G0J3 RPL17-201ENST00000578528 481 ntTSL 322.3■■□□□ 1.167e-17■■□□□ 12.2
LARP7Q4G0J3 RPL17-206ENST00000579495 914 ntTSL 219.17■□□□□ 0.667e-17■■□□□ 12.2
LARP7Q4G0J3 RPL17-209ENST00000580387 827 ntTSL 516.66■□□□□ 0.267e-17■■□□□ 12.2
LARP7Q4G0J3 RPL17-221ENST00000615760 650 ntTSL 316.4■□□□□ 0.227e-17■■□□□ 12.2
LARP7Q4G0J3 RPL17-220ENST00000615479 586 ntTSL 511.26□□□□□ -0.617e-17■■□□□ 12.2
LARP7Q4G0J3 RPL17-222ENST00000617346 795 ntTSL 510.16□□□□□ -0.787e-17■■□□□ 12.2
LARP7Q4G0J3 RPL17-211ENST00000581305 593 ntTSL 59.78□□□□□ -0.847e-17■■□□□ 12.2
LARP7Q4G0J3 RPL17-215ENST00000582782 562 ntTSL 37.38□□□□□ -1.237e-17■■□□□ 12.2
LARP7Q4G0J3 RPL17-203ENST00000578966 563 ntTSL 1 (best)6.88□□□□□ -1.317e-17■■□□□ 12.2
LARP7Q4G0J3 RPL17-217ENST00000583036 576 ntTSL 36.44□□□□□ -1.387e-17■■□□□ 12.2
LARP7Q4G0J3 SNORD58B-201ENST00000607313 66 ntBASIC4.83□□□□□ -1.647e-17■■□□□ 12.2
LARP7Q4G0J3 SNHG14-211ENST00000547292 626 ntTSL 5 BASIC10.33□□□□□ -0.762e-16■■□□□ 12.2
LARP7Q4G0J3 SNORD116-1-201ENST00000384335 95 ntBASIC8.13□□□□□ -1.112e-16■■□□□ 12.2
LARP7Q4G0J3 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC8.07□□□□□ -1.122e-16■■□□□ 12.2
LARP7Q4G0J3 FGG-209ENST00000465913 1573 ntTSL 27.37□□□□□ -1.235e-9■■□□□ 12.2
LARP7Q4G0J3 ZFAS1-210ENST00000623640 732 ntTSL 2 BASIC9.41□□□□□ -0.91e-323■■□□□ 12
LARP7Q4G0J3 SNORD12B-201ENST00000410433 91 ntBASIC4.23□□□□□ -1.731e-323■■□□□ 12
LARP7Q4G0J3 WDR43-206ENST00000466067 628 ntTSL 25.74□□□□□ -1.491e-323■■□□□ 11.9
LARP7Q4G0J3 SNORD53B-201ENST00000577887 78 ntBASIC1.55□□□□□ -2.161e-323■■□□□ 11.9
LARP7Q4G0J3 FN1-214ENST00000460217 804 ntTSL 210.19□□□□□ -0.781e-13■■□□□ 11.8
LARP7Q4G0J3 FN1-210ENST00000438981 723 ntTSL 27.76□□□□□ -1.171e-13■■□□□ 11.8
LARP7Q4G0J3 FN1-215ENST00000461974 571 ntTSL 26.66□□□□□ -1.341e-13■■□□□ 11.8
LARP7Q4G0J3 FN1-222ENST00000485567 584 ntTSL 1 (best)6.55□□□□□ -1.361e-13■■□□□ 11.8
LARP7Q4G0J3 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.015e-6■■□□□ 11.8
LARP7Q4G0J3 RPS10-NUDT3-202ENST00000639725 4782 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.635e-6■■□□□ 11.8
LARP7Q4G0J3 RPS10-NUDT3-203ENST00000639877 2911 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.825e-6■■□□□ 11.8
LARP7Q4G0J3 RPS10-NUDT3-201ENST00000605528 595 ntTSL 56.64□□□□□ -1.355e-6■■□□□ 11.8
LARP7Q4G0J3 MT-TF-201ENST00000387314 71 ntBASIC1.95□□□□□ -2.11e-43■■□□□ 11.8
LARP7Q4G0J3 GDF15-203ENST00000595973 890 ntTSL 518.43■□□□□ 0.549e-8■■□□□ 11.7
LARP7Q4G0J3 GDF15-202ENST00000594925 294 ntTSL 314.93□□□□□ -0.029e-8■■□□□ 11.7
LARP7Q4G0J3 HYOU1-215ENST00000543287 2464 ntTSL 218.23■□□□□ 0.515e-8■■□□□ 11.7
LARP7Q4G0J3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.97■□□□□ 0.475e-8■■□□□ 11.7
LARP7Q4G0J3 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.115e-8■■□□□ 11.7
LARP7Q4G0J3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14□□□□□ -0.175e-8■■□□□ 11.7
LARP7Q4G0J3 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC13.57□□□□□ -0.245e-8■■□□□ 11.7
LARP7Q4G0J3 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.49□□□□□ -0.255e-8■■□□□ 11.7
LARP7Q4G0J3 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC13.41□□□□□ -0.265e-8■■□□□ 11.7
LARP7Q4G0J3 HYOU1-207ENST00000530473 2023 ntTSL 513.24□□□□□ -0.295e-8■■□□□ 11.7
LARP7Q4G0J3 EHBP1L1-208ENST00000533237 2267 ntTSL 524.46■■□□□ 1.517e-12■■□□□ 11.7
LARP7Q4G0J3 EHBP1L1-211ENST00000634639 1643 ntTSL 523.6■■□□□ 1.377e-12■■□□□ 11.7
LARP7Q4G0J3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.367e-12■■□□□ 11.7
LARP7Q4G0J3 CANX-218ENST00000514032 1876 ntTSL 219.64■□□□□ 0.733e-8■■□□□ 11.6
LARP7Q4G0J3 CANX-209ENST00000504734 2232 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.363e-8■■□□□ 11.6
LARP7Q4G0J3 CANX-210ENST00000505090 485 ntTSL 29.57□□□□□ -0.883e-8■■□□□ 11.6
LARP7Q4G0J3 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.84□□□□□ -0.192e-12■■□□□ 11.6
LARP7Q4G0J3 SNHG1-206ENST00000537925 1487 ntTSL 1 (best) BASIC11□□□□□ -0.652e-12■■□□□ 11.6
LARP7Q4G0J3 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC9.47□□□□□ -0.892e-12■■□□□ 11.6
LARP7Q4G0J3 SNHG1-209ENST00000538654 2768 ntTSL 29.45□□□□□ -0.92e-12■■□□□ 11.6
LARP7Q4G0J3 SNHG1-224ENST00000545688 610 ntTSL 39.02□□□□□ -0.972e-12■■□□□ 11.6
LARP7Q4G0J3 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC8.36□□□□□ -1.072e-12■■□□□ 11.6
LARP7Q4G0J3 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC6.95□□□□□ -1.32e-12■■□□□ 11.6
LARP7Q4G0J3 SNHG1-203ENST00000537024 532 ntTSL 55.98□□□□□ -1.452e-12■■□□□ 11.6
LARP7Q4G0J3 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.71□□□□□ -1.52e-12■■□□□ 11.6
LARP7Q4G0J3 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.53□□□□□ -1.522e-12■■□□□ 11.6
LARP7Q4G0J3 SNHG1-214ENST00000540865 784 ntTSL 55.25□□□□□ -1.572e-12■■□□□ 11.6
LARP7Q4G0J3 SNHG1-202ENST00000535689 550 ntTSL 25.24□□□□□ -1.572e-12■■□□□ 11.6
LARP7Q4G0J3 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.16□□□□□ -1.582e-12■■□□□ 11.6
LARP7Q4G0J3 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.92□□□□□ -1.622e-12■■□□□ 11.6
LARP7Q4G0J3 SNHG1-220ENST00000544550 636 ntTSL 24.84□□□□□ -1.632e-12■■□□□ 11.6
LARP7Q4G0J3 HSP90B1-206ENST00000550479 698 ntTSL 27.59□□□□□ -1.195e-7■■□□□ 11.5
LARP7Q4G0J3 ZFAS1-207ENST00000458653 596 ntTSL 227.39■■□□□ 1.981e-323■■□□□ 11.5
LARP7Q4G0J3 ZFAS1-202ENST00000371743 1008 ntTSL 1 (best)24.54■■□□□ 1.521e-323■■□□□ 11.5
LARP7Q4G0J3 ZFAS1-203ENST00000417721 860 ntTSL 1 (best)23.64■■□□□ 1.371e-323■■□□□ 11.5
LARP7Q4G0J3 ZFAS1-205ENST00000441722 946 ntTSL 1 (best)20.91■□□□□ 0.941e-323■■□□□ 11.5
LARP7Q4G0J3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.91■□□□□ 0.941e-323■■□□□ 11.5
LARP7Q4G0J3 ZFAS1-204ENST00000428008 566 ntTSL 28.57□□□□□ -1.041e-323■■□□□ 11.5
LARP7Q4G0J3 ZFAS1-209ENST00000620594 508 ntTSL 38.27□□□□□ -1.091e-323■■□□□ 11.5
LARP7Q4G0J3 ZFAS1-201ENST00000326677 504 ntTSL 1 (best)7.14□□□□□ -1.271e-323■■□□□ 11.5
LARP7Q4G0J3 SNHG5-208ENST00000433843 388 ntTSL 23.74□□□□□ -1.812e-30■■□□□ 11.5
LARP7Q4G0J3 PWAR5-201ENST00000624480 3180 ntBASIC9.18□□□□□ -0.947e-12■■□□□ 11.5
LARP7Q4G0J3 AC124312.4-201ENST00000605533 310 ntBASIC7.69□□□□□ -1.187e-12■■□□□ 11.5
LARP7Q4G0J3 SNORD64-201ENST00000386683 67 ntBASIC-0.87□□□□□ -2.557e-12■■□□□ 11.5
LARP7Q4G0J3 SNHG14-218ENST00000553108 2208 ntTSL 1 (best) BASIC12.22□□□□□ -0.452e-7■■□□□ 11.4
LARP7Q4G0J3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.55■□□□□ 0.246e-7■■□□□ 11.4
LARP7Q4G0J3 AC092384.3-202ENST00000564646 2873 ntBASIC16.36■□□□□ 0.216e-7■■□□□ 11.4
LARP7Q4G0J3 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 06e-7■■□□□ 11.4
LARP7Q4G0J3 CBFA2T3-207ENST00000564416 399 ntTSL 514.95□□□□□ -0.026e-7■■□□□ 11.4
LARP7Q4G0J3 CBFA2T3-210ENST00000569464 1327 ntTSL 1 (best)13.39□□□□□ -0.276e-7■■□□□ 11.4
LARP7Q4G0J3 CBFA2T3-209ENST00000569443 469 ntTSL 512.31□□□□□ -0.446e-7■■□□□ 11.4
LARP7Q4G0J3 CBFA2T3-211ENST00000570046 284 ntTSL 39.41□□□□□ -0.96e-7■■□□□ 11.4
LARP7Q4G0J3 FN1-227ENST00000498719 2433 ntTSL 29.83□□□□□ -0.841e-14■■□□□ 11.4
LARP7Q4G0J3 P4HB-215ENST00000571507 493 ntTSL 25.37□□□□□ -1.553e-6■■□□□ 11.4
LARP7Q4G0J3 TBRG4-214ENST00000488222 972 ntTSL 316.8■□□□□ 0.283e-7■■□□□ 11.4
LARP7Q4G0J3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.1■□□□□ 0.173e-7■■□□□ 11.4
LARP7Q4G0J3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.96■□□□□ 0.143e-7■■□□□ 11.4
LARP7Q4G0J3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.053e-7■■□□□ 11.4
LARP7Q4G0J3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.013e-7■■□□□ 11.4
LARP7Q4G0J3 TBRG4-204ENST00000461363 856 ntTSL 214.86□□□□□ -0.033e-7■■□□□ 11.4
LARP7Q4G0J3 TBRG4-213ENST00000484326 835 ntTSL 214.86□□□□□ -0.033e-7■■□□□ 11.4
LARP7Q4G0J3 TBRG4-209ENST00000478532 945 ntTSL 512.54□□□□□ -0.43e-7■■□□□ 11.4
LARP7Q4G0J3 TBRG4-217ENST00000495973 3409 ntTSL 1 (best)10.94□□□□□ -0.663e-7■■□□□ 11.4
LARP7Q4G0J3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.47■□□□□ 0.712e-6■■□□□ 11.4
LARP7Q4G0J3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18■□□□□ 0.472e-6■■□□□ 11.4
LARP7Q4G0J3 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.61□□□□□ -0.072e-6■■□□□ 11.4
Retrieved 100 of 2,094 protein–RNA pairs in 59.3 ms