RNA–Protein interactions for RNA: ENST00000495973.5

TBRG4-217, Transcript of transforming growth factor beta regulator 4, humanhuman

TSL 1 (best)

Gene TBRG4, Length 3,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBRG4-217ENST00000495973 NISCHQ9Y2I1 1504 aa23.48■■□□□ 1.35
TBRG4-217ENST00000495973 SHROOM4Q9ULL8 1493 aa20.33■□□□□ 0.85
TBRG4-217ENST00000495973 DCAF8L2P0C7V8 631 aa20.23■□□□□ 0.83
TBRG4-217ENST00000495973 CCDC180Q9P1Z9 1646 aa19.89■□□□□ 0.77
TBRG4-217ENST00000495973 SUPT5HO00267 1087 aaKnown RBP19.82■□□□□ 0.76
TBRG4-217ENST00000495973 ZCCHC6Q5VYS8 1495 aaKnown RBP19.74■□□□□ 0.75
TBRG4-217ENST00000495973 ABCC9O60706 1549 aa19.19■□□□□ 0.66
TBRG4-217ENST00000495973 DCAF1Q9Y4B6 1507 aa19.02■□□□□ 0.64
TBRG4-217ENST00000495973 SCRIBQ14160 1630 aa18.97■□□□□ 0.63
TBRG4-217ENST00000495973 CHIC1Q5VXU3 224 aa18.85■□□□□ 0.61
TBRG4-217ENST00000495973 MYO15BQ96JP2 1530 aa18.66■□□□□ 0.58
TBRG4-217ENST00000495973 NACADO15069 1562 aa18.57■□□□□ 0.56
TBRG4-217ENST00000495973 RSF1Q96T23 1441 aaPredicted RBP18.55■□□□□ 0.56
TBRG4-217ENST00000495973 CECR2Q9BXF3 1484 aa18.5■□□□□ 0.55
TBRG4-217ENST00000495973 LOC105371045A0A1W2PR82 267 aa18.48■□□□□ 0.55
TBRG4-217ENST00000495973 EHMT2Q96KQ7 1210 aa18.47■□□□□ 0.55
TBRG4-217ENST00000495973 PABPN1Q86U42 306 aaKnown RBP eCLIP18.44■□□□□ 0.547e-9■□□□□ 8.5
TBRG4-217ENST00000495973 FAM9AQ8IZU1 332 aaPredicted RBP18.41■□□□□ 0.54
TBRG4-217ENST00000495973 RB1CC1Q8TDY2 1594 aa18.41■□□□□ 0.54
TBRG4-217ENST00000495973 MROH2BQ7Z745 1585 aa18.33■□□□□ 0.53
TBRG4-217ENST00000495973 TRIM41Q8WV44 630 aa18.33■□□□□ 0.53
TBRG4-217ENST00000495973 WIZO95785 1651 aa18.22■□□□□ 0.51
TBRG4-217ENST00000495973 PCGF6Q9BYE7 350 aa18.18■□□□□ 0.5
TBRG4-217ENST00000495973 UNC13AQ9UPW8 1703 aa18.06■□□□□ 0.48
TBRG4-217ENST00000495973 BAZ1AQ9NRL2 1556 aaPredicted RBP18.04■□□□□ 0.48
TBRG4-217ENST00000495973 SMARCA4P51532 1647 aa17.93■□□□□ 0.46
TBRG4-217ENST00000495973 BICRAQ9NZM4 1560 aa17.88■□□□□ 0.45
TBRG4-217ENST00000495973 PPARGC1BQ86YN6 1023 aaKnown RBP17.87■□□□□ 0.45
TBRG4-217ENST00000495973 CCDC88BA6NC98 1476 aa17.86■□□□□ 0.45
TBRG4-217ENST00000495973 ABCC8Q09428 1581 aa17.82■□□□□ 0.44
TBRG4-217ENST00000495973 TOP2AP11388 1531 aaKnown RBP17.81■□□□□ 0.44
TBRG4-217ENST00000495973 TTBK1Q5TCY1 1321 aaPredicted RBP17.75■□□□□ 0.43
TBRG4-217ENST00000495973 SMARCA2P51531 1590 aa17.74■□□□□ 0.43
TBRG4-217ENST00000495973 HRCP23327 699 aa17.73■□□□□ 0.43
TBRG4-217ENST00000495973 TRIM26Q12899 539 aaPredicted RBP17.68■□□□□ 0.42
TBRG4-217ENST00000495973 BAZ1BQ9UIG0 1483 aaKnown RBP17.61■□□□□ 0.41
TBRG4-217ENST00000495973 ATAD2BQ9ULI0 1458 aa17.6■□□□□ 0.41
TBRG4-217ENST00000495973 SOGA1O94964 1423 aa17.6■□□□□ 0.41
TBRG4-217ENST00000495973 UBTFP17480 764 aaKnown RBP17.6■□□□□ 0.41
TBRG4-217ENST00000495973 RANGAP1P46060 587 aaPredicted RBP17.6■□□□□ 0.41
TBRG4-217ENST00000495973 EIF4G1Q04637 1599 aaKnown RBP17.6■□□□□ 0.41
TBRG4-217ENST00000495973 RUSC2Q8N2Y8 1516 aa17.54■□□□□ 0.4
TBRG4-217ENST00000495973 WRNQ14191 1432 aaPredicted RBP eCLIP17.49■□□□□ 0.39
TBRG4-217ENST00000495973 CSRNP3Q8WYN3 585 aa17.49■□□□□ 0.39
TBRG4-217ENST00000495973 PEG3Q9GZU2 1588 aa17.42■□□□□ 0.38
TBRG4-217ENST00000495973 SYNJ1O43426 1573 aa17.35■□□□□ 0.37
TBRG4-217ENST00000495973 CEP162Q5TB80 1403 aa17.33■□□□□ 0.37
TBRG4-217ENST00000495973 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.26■□□□□ 0.35
TBRG4-217ENST00000495973 NCAPD3P42695 1498 aa17.23■□□□□ 0.35
TBRG4-217ENST00000495973 TNIKQ9UKE5 1360 aa17.23■□□□□ 0.35
TBRG4-217ENST00000495973 GOLGA3Q08378 1498 aa17.21■□□□□ 0.35
TBRG4-217ENST00000495973 EEA1Q15075 1411 aa17.21■□□□□ 0.35
TBRG4-217ENST00000495973 CCER1Q8TC90 406 aaPredicted RBP17.17■□□□□ 0.34
TBRG4-217ENST00000495973 RAPGEF2Q9Y4G8 1499 aa17.14■□□□□ 0.33
TBRG4-217ENST00000495973 HMGXB3Q12766 1538 aa17.13■□□□□ 0.33
TBRG4-217ENST00000495973 CEP164Q9UPV0 1460 aa17.12■□□□□ 0.33
TBRG4-217ENST00000495973 APLP2Q06481 763 aa17.11■□□□□ 0.33
TBRG4-217ENST00000495973 CLIP1P30622 1438 aa17.1■□□□□ 0.33
TBRG4-217ENST00000495973 HNRNPUL2Q1KMD3 747 aaKnown RBP17.08■□□□□ 0.33
TBRG4-217ENST00000495973 CC2D2AQ9P2K1 1620 aa17.07■□□□□ 0.32
TBRG4-217ENST00000495973 ZEB1P37275 1124 aaPredicted RBP17.06■□□□□ 0.32
TBRG4-217ENST00000495973 CUX1P39880 1505 aa17.06■□□□□ 0.32
TBRG4-217ENST00000495973 TOP2BQ02880 1626 aa17.06■□□□□ 0.32
TBRG4-217ENST00000495973 CFTRP13569 1480 aa17.05■□□□□ 0.32
TBRG4-217ENST00000495973 DNAJC5BQ9UF47 199 aa17.04■□□□□ 0.32
TBRG4-217ENST00000495973 CADPSQ9ULU8 1353 aa17.01■□□□□ 0.31
TBRG4-217ENST00000495973 KIF27Q86VH2 1401 aa16.96■□□□□ 0.31
TBRG4-217ENST00000495973 KIF21BO75037 1637 aa16.96■□□□□ 0.31
TBRG4-217ENST00000495973 NESP48681 1621 aa16.96■□□□□ 0.3
TBRG4-217ENST00000495973 CUX2O14529 1486 aa16.95■□□□□ 0.3
TBRG4-217ENST00000495973 ATP1B4Q9UN42 357 aaPredicted RBP16.93■□□□□ 0.3
TBRG4-217ENST00000495973 BIVM-ERCC5R4GMW8 1640 aa16.93■□□□□ 0.3
TBRG4-217ENST00000495973 P3H3Q8IVL6 736 aa16.93■□□□□ 0.3
TBRG4-217ENST00000495973 VPS8Q8N3P4 1428 aa16.89■□□□□ 0.29
TBRG4-217ENST00000495973 FANCD2Q9BXW9 1451 aa16.87■□□□□ 0.29
TBRG4-217ENST00000495973 FGD5Q6ZNL6 1462 aa16.87■□□□□ 0.29
TBRG4-217ENST00000495973 ITGAEP38570 1179 aa16.86■□□□□ 0.29
TBRG4-217ENST00000495973 PRXQ9BXM0 1461 aa16.85■□□□□ 0.29
TBRG4-217ENST00000495973 KANK4Q5T7N3 995 aaPredicted RBP16.84■□□□□ 0.29
TBRG4-217ENST00000495973 RAD54L2Q9Y4B4 1467 aa16.83■□□□□ 0.28
TBRG4-217ENST00000495973 PELP1Q8IZL8 1130 aaKnown RBP16.82■□□□□ 0.28
TBRG4-217ENST00000495973 IGF1RP08069 1367 aa16.81■□□□□ 0.28
TBRG4-217ENST00000495973 CARMIL1Q5VZK9 1371 aa16.79■□□□□ 0.28
TBRG4-217ENST00000495973 ARAP1Q96P48 1450 aa16.77■□□□□ 0.27
TBRG4-217ENST00000495973 ERICH3Q5RHP9 1530 aa16.74■□□□□ 0.27
TBRG4-217ENST00000495973 TDRD9Q8NDG6 1382 aaKnown RBP16.72■□□□□ 0.27
TBRG4-217ENST00000495973 PRDM2Q13029 1718 aa16.68■□□□□ 0.26
TBRG4-217ENST00000495973 TOPBP1Q92547 1522 aa16.68■□□□□ 0.26
TBRG4-217ENST00000495973 POLA1P09884 1462 aaPredicted RBP16.68■□□□□ 0.26
TBRG4-217ENST00000495973 ARHGAP35Q9NRY4 1499 aa16.68■□□□□ 0.26
TBRG4-217ENST00000495973 SCAF1Q9H7N4 1312 aaKnown RBP16.64■□□□□ 0.25
TBRG4-217ENST00000495973 DNMBPQ6XZF7 1577 aa16.61■□□□□ 0.25
TBRG4-217ENST00000495973 URB2Q14146 1524 aaKnown RBP16.61■□□□□ 0.25
TBRG4-217ENST00000495973 FAM50AQ14320 339 aaKnown RBP16.6■□□□□ 0.25
TBRG4-217ENST00000495973 ARID3CA6NKF2 412 aa16.59■□□□□ 0.25
TBRG4-217ENST00000495973 FHOD3Q2V2M9 1422 aa16.59■□□□□ 0.25
TBRG4-217ENST00000495973 PDS5BQ9NTI5 1447 aa16.58■□□□□ 0.24
TBRG4-217ENST00000495973 DIEXFQ68CQ4 756 aaKnown RBP16.57■□□□□ 0.24
TBRG4-217ENST00000495973 ABCA10Q8WWZ4 1543 aa16.53■□□□□ 0.24
TBRG4-217ENST00000495973 LAMC3Q9Y6N6 1575 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms