RNA–Protein interactions for RNA: ENST00000488222.5

TBRG4-214, Transcript of transforming growth factor beta regulator 4, humanhuman

TSL 3

Gene TBRG4, Length 972 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBRG4-214ENST00000488222 NISCHQ9Y2I1 1504 aa42.76■■■■■ 4.44
TBRG4-214ENST00000488222 CCDC180Q9P1Z9 1646 aa38.38■■■■□ 3.73
TBRG4-214ENST00000488222 ABCC9O60706 1549 aa38.17■■■■□ 3.7
TBRG4-214ENST00000488222 RB1CC1Q8TDY2 1594 aa36.36■■■■□ 3.41
TBRG4-214ENST00000488222 NACADO15069 1562 aa36.11■■■■□ 3.37
TBRG4-214ENST00000488222 DCAF8L2P0C7V8 631 aa35.9■■■■□ 3.34
TBRG4-214ENST00000488222 DNAJC5BQ9UF47 199 aa35.84■■■■□ 3.33
TBRG4-214ENST00000488222 MYO15BQ96JP2 1530 aa35.67■■■■□ 3.3
TBRG4-214ENST00000488222 UNC13AQ9UPW8 1703 aa35.62■■■■□ 3.29
TBRG4-214ENST00000488222 ZCCHC6Q5VYS8 1495 aaKnown RBP35.54■■■■□ 3.28
TBRG4-214ENST00000488222 PABPN1Q86U42 306 aaKnown RBP eCLIP35.44■■■■□ 3.26
TBRG4-214ENST00000488222 DCAF1Q9Y4B6 1507 aa35.34■■■■□ 3.25
TBRG4-214ENST00000488222 BICRAQ9NZM4 1560 aa35.28■■■■□ 3.24
TBRG4-214ENST00000488222 SCRIBQ14160 1630 aa34.97■■■■□ 3.19
TBRG4-214ENST00000488222 SHROOM4Q9ULL8 1493 aa34.9■■■■□ 3.18
TBRG4-214ENST00000488222 CC2D2AQ9P2K1 1620 aa34.52■■■■□ 3.12
TBRG4-214ENST00000488222 EIF4G1Q04637 1599 aaKnown RBP34.44■■■■□ 3.1
TBRG4-214ENST00000488222 CECR2Q9BXF3 1484 aa34.43■■■■□ 3.1
TBRG4-214ENST00000488222 SMARCA4P51532 1647 aa33.37■■■□□ 2.93
TBRG4-214ENST00000488222 NCAPD3P42695 1498 aa33.28■■■□□ 2.92
TBRG4-214ENST00000488222 SMARCA2P51531 1590 aa33.22■■■□□ 2.91
TBRG4-214ENST00000488222 BAZ1AQ9NRL2 1556 aaPredicted RBP33.22■■■□□ 2.91
TBRG4-214ENST00000488222 ATAD2BQ9ULI0 1458 aa33.22■■■□□ 2.91
TBRG4-214ENST00000488222 HMGXB3Q12766 1538 aa33.13■■■□□ 2.89
TBRG4-214ENST00000488222 DNAJC5Q9H3Z4 198 aa33.08■■■□□ 2.89
TBRG4-214ENST00000488222 CUX2O14529 1486 aa33.05■■■□□ 2.88
TBRG4-214ENST00000488222 ERCC6Q03468 1493 aa33■■■□□ 2.87
TBRG4-214ENST00000488222 PEG3Q9GZU2 1588 aa33■■■□□ 2.87
TBRG4-214ENST00000488222 BAZ1BQ9UIG0 1483 aaKnown RBP32.98■■■□□ 2.87
TBRG4-214ENST00000488222 MROH2BQ7Z745 1585 aa32.96■■■□□ 2.87
TBRG4-214ENST00000488222 NESP48681 1621 aa32.75■■■□□ 2.83
TBRG4-214ENST00000488222 WIZO95785 1651 aa32.66■■■□□ 2.82
TBRG4-214ENST00000488222 LAMC3Q9Y6N6 1575 aa32.59■■■□□ 2.81
TBRG4-214ENST00000488222 THOC2Q8NI27 1593 aaKnown RBP32.54■■■□□ 2.8
TBRG4-214ENST00000488222 KIF21AQ7Z4S6 1674 aa32.41■■■□□ 2.78
TBRG4-214ENST00000488222 PDS5BQ9NTI5 1447 aa32.36■■■□□ 2.77
TBRG4-214ENST00000488222 RSF1Q96T23 1441 aaPredicted RBP32.34■■■□□ 2.77
TBRG4-214ENST00000488222 CADPSQ9ULU8 1353 aa32.25■■■□□ 2.75
TBRG4-214ENST00000488222 TOP2AP11388 1531 aaKnown RBP32.25■■■□□ 2.75
TBRG4-214ENST00000488222 MRC2Q9UBG0 1479 aa32.1■■■□□ 2.73
TBRG4-214ENST00000488222 WDR62O43379 1518 aa32.06■■■□□ 2.72
TBRG4-214ENST00000488222 CFTRP13569 1480 aa31.98■■■□□ 2.71
TBRG4-214ENST00000488222 CEP164Q9UPV0 1460 aa31.98■■■□□ 2.71
TBRG4-214ENST00000488222 FANCD2Q9BXW9 1451 aa31.95■■■□□ 2.7
TBRG4-214ENST00000488222 PRDM2Q13029 1718 aa31.94■■■□□ 2.7
TBRG4-214ENST00000488222 CCDC88BA6NC98 1476 aa31.8■■■□□ 2.68
TBRG4-214ENST00000488222 URB2Q14146 1524 aaKnown RBP31.66■■■□□ 2.66
TBRG4-214ENST00000488222 TRIM41Q8WV44 630 aa31.52■■■□□ 2.64
TBRG4-214ENST00000488222 OSCARQ8IYS5 282 aa31.4■■■□□ 2.62
TBRG4-214ENST00000488222 TOPBP1Q92547 1522 aa31.39■■■□□ 2.61
TBRG4-214ENST00000488222 DNMBPQ6XZF7 1577 aa31.34■■■□□ 2.61
TBRG4-214ENST00000488222 ABCC8Q09428 1581 aa31.33■■■□□ 2.61
TBRG4-214ENST00000488222 IFT140Q96RY7 1462 aa31.32■■■□□ 2.6
TBRG4-214ENST00000488222 ZNF608Q9ULD9 1512 aaPredicted RBP31.24■■■□□ 2.59
TBRG4-214ENST00000488222 EIF4G3O43432 1585 aaKnown RBP31.17■■■□□ 2.58
TBRG4-214ENST00000488222 SUPT5HO00267 1087 aaKnown RBP31.15■■■□□ 2.58
TBRG4-214ENST00000488222 TARBP1Q13395 1621 aaKnown RBP31.12■■■□□ 2.57
TBRG4-214ENST00000488222 RIMBP3CA6NJZ7 1639 aa31.09■■■□□ 2.57
TBRG4-214ENST00000488222 RIMBP3BA6NNM3 1639 aa31.09■■■□□ 2.57
TBRG4-214ENST00000488222 RIMBP3Q9UFD9 1639 aa31.09■■■□□ 2.57
TBRG4-214ENST00000488222 POLA1P09884 1462 aaPredicted RBP31.08■■■□□ 2.57
TBRG4-214ENST00000488222 ARHGEF11O15085 1522 aa30.98■■■□□ 2.55
TBRG4-214ENST00000488222 CUX1P39880 1505 aa30.97■■■□□ 2.55
TBRG4-214ENST00000488222 FGD5Q6ZNL6 1462 aa30.95■■■□□ 2.54
TBRG4-214ENST00000488222 AQRO60306 1485 aaKnown RBP eCLIP30.94■■■□□ 2.545e-8■■■■■ 37.3
TBRG4-214ENST00000488222 RAD54L2Q9Y4B4 1467 aa30.94■■■□□ 2.54
TBRG4-214ENST00000488222 CHD1O14646 1710 aa30.93■■■□□ 2.54
TBRG4-214ENST00000488222 SOGA1O94964 1423 aa30.9■■■□□ 2.54
TBRG4-214ENST00000488222 WDR97A6NE52 1622 aa30.85■■■□□ 2.53
TBRG4-214ENST00000488222 TDRD9Q8NDG6 1382 aaKnown RBP30.79■■■□□ 2.52
TBRG4-214ENST00000488222 PBRM1Q86U86 1689 aa30.7■■■□□ 2.5
TBRG4-214ENST00000488222 SNAPC4Q5SXM2 1469 aa30.7■■■□□ 2.5
TBRG4-214ENST00000488222 FBLN2P98095 1184 aa30.68■■■□□ 2.5
TBRG4-214ENST00000488222 ARAP1Q96P48 1450 aa30.65■■■□□ 2.5
TBRG4-214ENST00000488222 CYB5RLQ6IPT4 315 aa30.65■■■□□ 2.5
TBRG4-214ENST00000488222 GRIN2BQ13224 1484 aa30.63■■■□□ 2.49
TBRG4-214ENST00000488222 BIVM-ERCC5R4GMW8 1640 aa30.63■■■□□ 2.49
TBRG4-214ENST00000488222 MAGI1Q96QZ7 1491 aaPredicted RBP30.63■■■□□ 2.49
TBRG4-214ENST00000488222 TOP2BQ02880 1626 aa30.6■■■□□ 2.49
TBRG4-214ENST00000488222 ABCA5Q8WWZ7 1642 aa30.6■■■□□ 2.49
TBRG4-214ENST00000488222 ABCA10Q8WWZ4 1543 aa30.59■■■□□ 2.49
TBRG4-214ENST00000488222 SYNJ1O43426 1573 aa30.58■■■□□ 2.49
TBRG4-214ENST00000488222 GAPVD1Q14C86 1478 aa30.57■■■□□ 2.48
TBRG4-214ENST00000488222 CLASP1Q7Z460 1538 aa30.57■■■□□ 2.48
TBRG4-214ENST00000488222 WRNQ14191 1432 aaPredicted RBP eCLIP30.55■■■□□ 2.48
TBRG4-214ENST00000488222 SYNJ2O15056 1496 aa30.5■■■□□ 2.47
TBRG4-214ENST00000488222 CHMP7Q8WUX9 453 aaPredicted RBP30.48■■■□□ 2.47
TBRG4-214ENST00000488222 TRHP20396 242 aaPredicted RBP30.35■■■□□ 2.45
TBRG4-214ENST00000488222 ADAMTS12P58397 1594 aa30.35■■■□□ 2.45
TBRG4-214ENST00000488222 GRIN2AQ12879 1464 aa30.25■■■□□ 2.43
TBRG4-214ENST00000488222 ERICH3Q5RHP9 1530 aa30.25■■■□□ 2.43
TBRG4-214ENST00000488222 FHAD1B1AJZ9 1412 aa30.18■■■□□ 2.42
TBRG4-214ENST00000488222 CEP170Q5SW79 1584 aa30.17■■■□□ 2.42
TBRG4-214ENST00000488222 NUP160Q12769 1436 aa30.11■■■□□ 2.41
TBRG4-214ENST00000488222 SHROOM2Q13796 1616 aa30.03■■■□□ 2.4
TBRG4-214ENST00000488222 ERCC6L2Q5T890 1561 aa30.02■■■□□ 2.4
TBRG4-214ENST00000488222 CUL7Q14999 1698 aa29.95■■■□□ 2.39
TBRG4-214ENST00000488222 KIF27Q86VH2 1401 aa29.94■■■□□ 2.38
TBRG4-214ENST00000488222 RUSC2Q8N2Y8 1516 aa29.92■■■□□ 2.38
TBRG4-214ENST00000488222 IGF1RP08069 1367 aa29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms