Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC142381.2-201ENST00000566120 298 ntBASIC27.85■■■□□ 2.05
ALDH1A1P00352 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC27.85■■■□□ 2.05
ALDH1A1P00352 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
ALDH1A1P00352 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
ALDH1A1P00352 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC27.84■■■□□ 2.05
ALDH1A1P00352 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
ALDH1A1P00352 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC27.84■■■□□ 2.05
ALDH1A1P00352 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC27.84■■■□□ 2.05
ALDH1A1P00352 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC27.83■■■□□ 2.05
ALDH1A1P00352 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC27.83■■■□□ 2.05
ALDH1A1P00352 QDPR-206ENST00000508623 601 ntTSL 3 BASIC27.83■■■□□ 2.05
ALDH1A1P00352 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC27.83■■■□□ 2.05
ALDH1A1P00352 MIR5787-201ENST00000611784 55 ntBASIC27.83■■■□□ 2.05
ALDH1A1P00352 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
ALDH1A1P00352 PBX2P1-201ENST00000493219 1291 ntBASIC27.82■■■□□ 2.04
ALDH1A1P00352 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC27.82■■■□□ 2.04
ALDH1A1P00352 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
ALDH1A1P00352 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC27.82■■■□□ 2.04
ALDH1A1P00352 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
ALDH1A1P00352 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC27.81■■■□□ 2.04
ALDH1A1P00352 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC27.81■■■□□ 2.04
ALDH1A1P00352 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
ALDH1A1P00352 TK2-202ENST00000417693 1046 ntTSL 2 BASIC27.8■■■□□ 2.04
ALDH1A1P00352 SENP5-202ENST00000419026 973 ntTSL 3 BASIC27.8■■■□□ 2.04
ALDH1A1P00352 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC27.8■■■□□ 2.04
ALDH1A1P00352 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.8■■■□□ 2.04
ALDH1A1P00352 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC27.79■■■□□ 2.04
ALDH1A1P00352 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC27.79■■■□□ 2.04
ALDH1A1P00352 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC27.79■■■□□ 2.04
ALDH1A1P00352 AC135279.3-201ENST00000610945 1311 ntBASIC27.79■■■□□ 2.04
ALDH1A1P00352 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC27.79■■■□□ 2.04
ALDH1A1P00352 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
ALDH1A1P00352 AC011551.1-201ENST00000614101 683 ntBASIC27.78■■■□□ 2.04
ALDH1A1P00352 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
ALDH1A1P00352 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
ALDH1A1P00352 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
ALDH1A1P00352 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC27.77■■■□□ 2.04
ALDH1A1P00352 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC27.77■■■□□ 2.04
ALDH1A1P00352 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
ALDH1A1P00352 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.03
ALDH1A1P00352 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC27.76■■■□□ 2.03
ALDH1A1P00352 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
ALDH1A1P00352 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
ALDH1A1P00352 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC27.76■■■□□ 2.03
ALDH1A1P00352 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
ALDH1A1P00352 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC27.75■■■□□ 2.03
ALDH1A1P00352 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC27.75■■■□□ 2.03
ALDH1A1P00352 LGR4-203ENST00000480977 492 ntTSL 2 BASIC27.75■■■□□ 2.03
ALDH1A1P00352 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC27.75■■■□□ 2.03
ALDH1A1P00352 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
ALDH1A1P00352 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
ALDH1A1P00352 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
ALDH1A1P00352 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
ALDH1A1P00352 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
ALDH1A1P00352 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
ALDH1A1P00352 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC27.74■■■□□ 2.03
ALDH1A1P00352 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
ALDH1A1P00352 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC27.74■■■□□ 2.03
ALDH1A1P00352 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
ALDH1A1P00352 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
ALDH1A1P00352 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
ALDH1A1P00352 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
ALDH1A1P00352 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
ALDH1A1P00352 GAK-223ENST00000628912 497 ntTSL 5 BASIC27.73■■■□□ 2.03
ALDH1A1P00352 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
ALDH1A1P00352 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC27.72■■■□□ 2.03
ALDH1A1P00352 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
ALDH1A1P00352 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC27.72■■■□□ 2.03
ALDH1A1P00352 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC27.72■■■□□ 2.03
ALDH1A1P00352 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC27.71■■■□□ 2.03
ALDH1A1P00352 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC27.71■■■□□ 2.03
ALDH1A1P00352 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
ALDH1A1P00352 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.03
ALDH1A1P00352 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
ALDH1A1P00352 SUDS3P1-201ENST00000505831 966 ntBASIC27.7■■■□□ 2.02
ALDH1A1P00352 RASSF1-AS1-201ENST00000629828 790 ntBASIC27.7■■■□□ 2.02
ALDH1A1P00352 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC27.7■■■□□ 2.02
ALDH1A1P00352 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
ALDH1A1P00352 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
ALDH1A1P00352 CD72-202ENST00000378430 585 ntTSL 3 BASIC27.69■■■□□ 2.02
ALDH1A1P00352 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC27.69■■■□□ 2.02
ALDH1A1P00352 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC27.69■■■□□ 2.02
ALDH1A1P00352 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC27.69■■■□□ 2.02
ALDH1A1P00352 CLTA-210ENST00000540080 989 ntTSL 2 BASIC27.69■■■□□ 2.02
ALDH1A1P00352 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC27.69■■■□□ 2.02
ALDH1A1P00352 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
ALDH1A1P00352 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.68■■■□□ 2.02
ALDH1A1P00352 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
ALDH1A1P00352 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC27.68■■■□□ 2.02
ALDH1A1P00352 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
ALDH1A1P00352 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
ALDH1A1P00352 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC27.68■■■□□ 2.02
ALDH1A1P00352 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
ALDH1A1P00352 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
ALDH1A1P00352 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC27.67■■■□□ 2.02
ALDH1A1P00352 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC27.67■■■□□ 2.02
ALDH1A1P00352 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
ALDH1A1P00352 AL031432.3-201ENST00000607698 485 ntBASIC27.67■■■□□ 2.02
ALDH1A1P00352 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC27.67■■■□□ 2.02
ALDH1A1P00352 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC27.67■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms