Protein–RNA interactions for Protein: A6NNJ1

FAM90A9P, Putative protein FAM90A9P, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A9PA6NNJ1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.51■□□□□ 0.71
FAM90A9PA6NNJ1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.51■□□□□ 0.71
FAM90A9PA6NNJ1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FAM90A9PA6NNJ1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FAM90A9PA6NNJ1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.51■□□□□ 0.71
FAM90A9PA6NNJ1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.5■□□□□ 0.71
FAM90A9PA6NNJ1 AC009831.1-201ENST00000580420 1582 ntBASIC19.5■□□□□ 0.71
FAM90A9PA6NNJ1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
FAM90A9PA6NNJ1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.5■□□□□ 0.71
FAM90A9PA6NNJ1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
FAM90A9PA6NNJ1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.49■□□□□ 0.71
FAM90A9PA6NNJ1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
FAM90A9PA6NNJ1 U85056.1-201ENST00000616429 682 ntBASIC19.49■□□□□ 0.71
FAM90A9PA6NNJ1 AC133552.2-201ENST00000619106 1032 ntBASIC19.49■□□□□ 0.71
FAM90A9PA6NNJ1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.49■□□□□ 0.71
FAM90A9PA6NNJ1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
FAM90A9PA6NNJ1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
FAM90A9PA6NNJ1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
FAM90A9PA6NNJ1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
FAM90A9PA6NNJ1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.49■□□□□ 0.71
FAM90A9PA6NNJ1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FAM90A9PA6NNJ1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.48■□□□□ 0.71
FAM90A9PA6NNJ1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.48■□□□□ 0.71
FAM90A9PA6NNJ1 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.48■□□□□ 0.71
FAM90A9PA6NNJ1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FAM90A9PA6NNJ1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FAM90A9PA6NNJ1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FAM90A9PA6NNJ1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
FAM90A9PA6NNJ1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FAM90A9PA6NNJ1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.47■□□□□ 0.71
FAM90A9PA6NNJ1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
FAM90A9PA6NNJ1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.47■□□□□ 0.71
FAM90A9PA6NNJ1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.47■□□□□ 0.71
FAM90A9PA6NNJ1 AC022211.4-201ENST00000625094 2161 ntBASIC19.47■□□□□ 0.71
FAM90A9PA6NNJ1 AC096887.2-201ENST00000623443 1957 ntBASIC19.46■□□□□ 0.71
FAM90A9PA6NNJ1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FAM90A9PA6NNJ1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
FAM90A9PA6NNJ1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FAM90A9PA6NNJ1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
FAM90A9PA6NNJ1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FAM90A9PA6NNJ1 NTF6A-201ENST00000591175 560 ntBASIC19.46■□□□□ 0.71
FAM90A9PA6NNJ1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
FAM90A9PA6NNJ1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.46■□□□□ 0.71
FAM90A9PA6NNJ1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.46■□□□□ 0.71
FAM90A9PA6NNJ1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FAM90A9PA6NNJ1 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FAM90A9PA6NNJ1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FAM90A9PA6NNJ1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FAM90A9PA6NNJ1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FAM90A9PA6NNJ1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
FAM90A9PA6NNJ1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FAM90A9PA6NNJ1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FAM90A9PA6NNJ1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FAM90A9PA6NNJ1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FAM90A9PA6NNJ1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
FAM90A9PA6NNJ1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FAM90A9PA6NNJ1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FAM90A9PA6NNJ1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FAM90A9PA6NNJ1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FAM90A9PA6NNJ1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FAM90A9PA6NNJ1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
FAM90A9PA6NNJ1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FAM90A9PA6NNJ1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FAM90A9PA6NNJ1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.43■□□□□ 0.7
FAM90A9PA6NNJ1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FAM90A9PA6NNJ1 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FAM90A9PA6NNJ1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.43■□□□□ 0.7
FAM90A9PA6NNJ1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
FAM90A9PA6NNJ1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FAM90A9PA6NNJ1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.42■□□□□ 0.7
FAM90A9PA6NNJ1 AL592293.1-201ENST00000502889 1188 ntBASIC19.42■□□□□ 0.7
FAM90A9PA6NNJ1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
FAM90A9PA6NNJ1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FAM90A9PA6NNJ1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FAM90A9PA6NNJ1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FAM90A9PA6NNJ1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FAM90A9PA6NNJ1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FAM90A9PA6NNJ1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FAM90A9PA6NNJ1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
FAM90A9PA6NNJ1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.41■□□□□ 0.7
FAM90A9PA6NNJ1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FAM90A9PA6NNJ1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.41■□□□□ 0.7
FAM90A9PA6NNJ1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FAM90A9PA6NNJ1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FAM90A9PA6NNJ1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FAM90A9PA6NNJ1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FAM90A9PA6NNJ1 AC138932.3-201ENST00000567634 1902 ntBASIC19.41■□□□□ 0.7
FAM90A9PA6NNJ1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FAM90A9PA6NNJ1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FAM90A9PA6NNJ1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FAM90A9PA6NNJ1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FAM90A9PA6NNJ1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FAM90A9PA6NNJ1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
FAM90A9PA6NNJ1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FAM90A9PA6NNJ1 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FAM90A9PA6NNJ1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FAM90A9PA6NNJ1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
FAM90A9PA6NNJ1 AL139125.2-201ENST00000623134 1869 ntBASIC19.39■□□□□ 0.7
FAM90A9PA6NNJ1 KRT18P60-201ENST00000312876 1297 ntBASIC19.39■□□□□ 0.69
FAM90A9PA6NNJ1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms