Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 IER3-202ENST00000376377 1350 ntBASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 TSPY26P-202ENST00000565928 3884 ntBASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 AC005332.3-201ENST00000589904 676 ntBASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 AC063926.3-201ENST00000624734 5658 ntBASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 AC002310.6-201ENST00000624451 1377 ntBASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB1Q9Y5G3 LINC00895-201ENST00000629028 1637 ntBASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms