Protein–RNA interactions for Protein: Q8IZA3

H1FOO, Histone H1oo, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1FOOQ8IZA3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 BX005266.1-201ENST00000473402 457 ntBASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 AP001269.4-201ENST00000609611 512 ntBASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 AP000550.4-202ENST00000639755 178 ntBASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H1FOOQ8IZA3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 AC068418.2-201ENST00000577309 3703 ntBASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 AL365203.3-201ENST00000609742 2057 ntBASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 AC069148.1-201ENST00000608741 768 ntBASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 AL022326.1-202ENST00000641533 845 ntBASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 HYMAI-201ENST00000635591 3347 ntBASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 SNX33P1-201ENST00000592116 1762 ntBASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
H1FOOQ8IZA3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H1FOOQ8IZA3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
H1FOOQ8IZA3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H1FOOQ8IZA3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
H1FOOQ8IZA3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
H1FOOQ8IZA3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
H1FOOQ8IZA3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H1FOOQ8IZA3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H1FOOQ8IZA3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.9□□□□□ -0.18
H1FOOQ8IZA3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H1FOOQ8IZA3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
H1FOOQ8IZA3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H1FOOQ8IZA3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H1FOOQ8IZA3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.9□□□□□ -0.18
H1FOOQ8IZA3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
H1FOOQ8IZA3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
H1FOOQ8IZA3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H1FOOQ8IZA3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms