Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC12.88□□□□□ -0.35
HIST1H1AQ02539 AP000550.4-202ENST00000639755 178 ntBASIC12.88□□□□□ -0.35
HIST1H1AQ02539 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1AQ02539 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
HIST1H1AQ02539 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1AQ02539 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC12.88□□□□□ -0.35
HIST1H1AQ02539 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
HIST1H1AQ02539 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1AQ02539 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
HIST1H1AQ02539 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1AQ02539 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H1AQ02539 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1AQ02539 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1AQ02539 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 CCS-201ENST00000310190 942 ntTSL 5 BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 BET1L-202ENST00000332865 533 ntTSL 5 BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 RCN1P2-201ENST00000398357 915 ntBASIC12.87□□□□□ -0.35
HIST1H1AQ02539 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 SRP19-202ENST00000445150 833 ntTSL 2 BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 CDV3-207ENST00000508481 661 ntTSL 3 BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 AC114341.1-201ENST00000618070 349 ntBASIC12.87□□□□□ -0.35
HIST1H1AQ02539 BCL10-202ENST00000620248 774 ntTSL 5 BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 AD001527.2-201ENST00000622994 785 ntBASIC12.87□□□□□ -0.35
HIST1H1AQ02539 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 AL662844.4-201ENST00000606367 2838 ntBASIC12.87□□□□□ -0.35
HIST1H1AQ02539 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC12.87□□□□□ -0.35
HIST1H1AQ02539 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 INTS4P1-201ENST00000438455 1935 ntBASIC12.86□□□□□ -0.35
HIST1H1AQ02539 GPR89P-201ENST00000407924 1495 ntBASIC12.86□□□□□ -0.35
HIST1H1AQ02539 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 NUS1P2-201ENST00000417358 873 ntBASIC12.86□□□□□ -0.35
HIST1H1AQ02539 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 SIGLEC30P-201ENST00000455569 941 ntBASIC12.86□□□□□ -0.35
HIST1H1AQ02539 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms