Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
SRP54P61011 AC109322.1-201ENST00000524499 1264 ntBASIC16.49■□□□□ 0.23
SRP54P61011 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SRP54P61011 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
SRP54P61011 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.49■□□□□ 0.23
SRP54P61011 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.49■□□□□ 0.23
SRP54P61011 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.49■□□□□ 0.23
SRP54P61011 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.49■□□□□ 0.23
SRP54P61011 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SRP54P61011 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.49■□□□□ 0.23
SRP54P61011 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.49■□□□□ 0.23
SRP54P61011 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.49■□□□□ 0.23
SRP54P61011 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SRP54P61011 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.49■□□□□ 0.23
SRP54P61011 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.49■□□□□ 0.23
SRP54P61011 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRP54P61011 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.49■□□□□ 0.23
SRP54P61011 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SRP54P61011 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.49■□□□□ 0.23
SRP54P61011 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.49■□□□□ 0.23
SRP54P61011 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
SRP54P61011 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.49■□□□□ 0.23
SRP54P61011 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRP54P61011 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SRP54P61011 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRP54P61011 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SRP54P61011 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SRP54P61011 AC108860.2-201ENST00000562760 2183 ntBASIC16.48■□□□□ 0.23
SRP54P61011 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRP54P61011 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SRP54P61011 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRP54P61011 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SRP54P61011 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SRP54P61011 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SRP54P61011 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.48■□□□□ 0.23
SRP54P61011 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRP54P61011 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.48■□□□□ 0.23
SRP54P61011 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRP54P61011 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRP54P61011 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.48■□□□□ 0.23
SRP54P61011 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRP54P61011 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SRP54P61011 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
SRP54P61011 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRP54P61011 SPCS2P4-201ENST00000436160 681 ntBASIC16.48■□□□□ 0.23
SRP54P61011 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SRP54P61011 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SRP54P61011 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.48■□□□□ 0.23
SRP54P61011 IGHV3-62-201ENST00000520057 340 ntBASIC16.48■□□□□ 0.23
SRP54P61011 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.48■□□□□ 0.23
SRP54P61011 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.48■□□□□ 0.23
SRP54P61011 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.48■□□□□ 0.23
SRP54P61011 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.48■□□□□ 0.23
SRP54P61011 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.48■□□□□ 0.23
SRP54P61011 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SRP54P61011 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.48■□□□□ 0.23
SRP54P61011 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SRP54P61011 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRP54P61011 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.48■□□□□ 0.23
SRP54P61011 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRP54P61011 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRP54P61011 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SRP54P61011 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRP54P61011 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.48■□□□□ 0.23
SRP54P61011 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
SRP54P61011 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRP54P61011 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRP54P61011 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.48■□□□□ 0.23
SRP54P61011 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.47■□□□□ 0.23
SRP54P61011 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SRP54P61011 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SRP54P61011 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SRP54P61011 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.47■□□□□ 0.23
SRP54P61011 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.47■□□□□ 0.23
SRP54P61011 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SRP54P61011 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SRP54P61011 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
SRP54P61011 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SRP54P61011 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SRP54P61011 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
SRP54P61011 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SRP54P61011 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.47■□□□□ 0.23
SRP54P61011 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SRP54P61011 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SRP54P61011 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SRP54P61011 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SRP54P61011 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.47■□□□□ 0.23
SRP54P61011 KRT18P32-201ENST00000424695 1287 ntBASIC16.47■□□□□ 0.23
SRP54P61011 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.47■□□□□ 0.23
SRP54P61011 AC069335.1-201ENST00000489972 472 ntBASIC16.47■□□□□ 0.23
SRP54P61011 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SRP54P61011 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SRP54P61011 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.47■□□□□ 0.23
SRP54P61011 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SRP54P61011 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.47■□□□□ 0.23
SRP54P61011 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
SRP54P61011 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SRP54P61011 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.47■□□□□ 0.23
SRP54P61011 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SRP54P61011 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms