Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.39■□□□□ 0.53
PMS1P54277 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PMS1P54277 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PMS1P54277 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PMS1P54277 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PMS1P54277 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PMS1P54277 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.39■□□□□ 0.53
PMS1P54277 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PMS1P54277 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PMS1P54277 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.39■□□□□ 0.53
PMS1P54277 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PMS1P54277 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
PMS1P54277 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
PMS1P54277 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PMS1P54277 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.38■□□□□ 0.53
PMS1P54277 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.38■□□□□ 0.53
PMS1P54277 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PMS1P54277 GPAA1P2-202ENST00000606848 1787 ntBASIC18.38■□□□□ 0.53
PMS1P54277 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PMS1P54277 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PMS1P54277 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PMS1P54277 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
PMS1P54277 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PMS1P54277 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PMS1P54277 RNA5SP419-201ENST00000515908 135 ntBASIC18.38■□□□□ 0.53
PMS1P54277 AP002469.2-201ENST00000531724 424 ntBASIC18.38■□□□□ 0.53
PMS1P54277 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.38■□□□□ 0.53
PMS1P54277 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.38■□□□□ 0.53
PMS1P54277 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.38■□□□□ 0.53
PMS1P54277 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.38■□□□□ 0.53
PMS1P54277 ACTL9-202ENST00000612068 1252 ntBASIC18.38■□□□□ 0.53
PMS1P54277 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PMS1P54277 MIR1199-201ENST00000621445 119 ntBASIC18.38■□□□□ 0.53
PMS1P54277 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PMS1P54277 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PMS1P54277 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PMS1P54277 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PMS1P54277 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PMS1P54277 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PMS1P54277 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.38■□□□□ 0.53
PMS1P54277 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.38■□□□□ 0.53
PMS1P54277 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.38■□□□□ 0.53
PMS1P54277 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.38■□□□□ 0.53
PMS1P54277 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.38■□□□□ 0.53
PMS1P54277 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.37■□□□□ 0.53
PMS1P54277 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
PMS1P54277 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PMS1P54277 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.37■□□□□ 0.53
PMS1P54277 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PMS1P54277 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PMS1P54277 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PMS1P54277 AL596087.1-201ENST00000400979 1969 ntBASIC18.37■□□□□ 0.53
PMS1P54277 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.37■□□□□ 0.53
PMS1P54277 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PMS1P54277 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PMS1P54277 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PMS1P54277 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PMS1P54277 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PMS1P54277 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PMS1P54277 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.37■□□□□ 0.53
PMS1P54277 MRPL3P1-201ENST00000400109 1033 ntBASIC18.37■□□□□ 0.53
PMS1P54277 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.37■□□□□ 0.53
PMS1P54277 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
PMS1P54277 AC092910.1-201ENST00000482027 1129 ntBASIC18.37■□□□□ 0.53
PMS1P54277 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.37■□□□□ 0.53
PMS1P54277 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.37■□□□□ 0.53
PMS1P54277 AC087641.1-201ENST00000557561 1021 ntBASIC18.37■□□□□ 0.53
PMS1P54277 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.37■□□□□ 0.53
PMS1P54277 AC005412.3-201ENST00000580309 715 ntBASIC18.37■□□□□ 0.53
PMS1P54277 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PMS1P54277 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PMS1P54277 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.37■□□□□ 0.53
PMS1P54277 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.37■□□□□ 0.53
PMS1P54277 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.37■□□□□ 0.53
PMS1P54277 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PMS1P54277 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PMS1P54277 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PMS1P54277 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PMS1P54277 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PMS1P54277 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
PMS1P54277 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PMS1P54277 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.37■□□□□ 0.53
PMS1P54277 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.37■□□□□ 0.53
PMS1P54277 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.37■□□□□ 0.53
PMS1P54277 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PMS1P54277 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PMS1P54277 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PMS1P54277 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PMS1P54277 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PMS1P54277 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PMS1P54277 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PMS1P54277 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PMS1P54277 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PMS1P54277 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PMS1P54277 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PMS1P54277 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PMS1P54277 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.36■□□□□ 0.53
PMS1P54277 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PMS1P54277 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
PMS1P54277 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms