Protein–RNA interactions for Protein: P13637

ATP1A3, Sodium/potassium-transporting ATPase subunit alpha-3, humanhuman

Predictions only

Length 1,013 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3P13637 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP1A3P13637 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP1A3P13637 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP1A3P13637 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP1A3P13637 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP1A3P13637 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP1A3P13637 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
ATP1A3P13637 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP1A3P13637 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.46■□□□□ 0.55
ATP1A3P13637 AC012615.1-201ENST00000565797 1299 ntBASIC18.46■□□□□ 0.55
ATP1A3P13637 MPDU1-223ENST00000582151 728 ntBASIC18.46■□□□□ 0.55
ATP1A3P13637 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.46■□□□□ 0.55
ATP1A3P13637 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ATP1A3P13637 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP1A3P13637 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP1A3P13637 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.46■□□□□ 0.55
ATP1A3P13637 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
ATP1A3P13637 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
ATP1A3P13637 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
ATP1A3P13637 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP1A3P13637 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP1A3P13637 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
ATP1A3P13637 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
ATP1A3P13637 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.46■□□□□ 0.55
ATP1A3P13637 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
ATP1A3P13637 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
ATP1A3P13637 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
ATP1A3P13637 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
ATP1A3P13637 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ATP1A3P13637 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ATP1A3P13637 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ATP1A3P13637 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ATP1A3P13637 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP1A3P13637 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
ATP1A3P13637 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.45■□□□□ 0.54
ATP1A3P13637 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.45■□□□□ 0.54
ATP1A3P13637 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP1A3P13637 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP1A3P13637 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ATP1A3P13637 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP1A3P13637 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP1A3P13637 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ATP1A3P13637 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP1A3P13637 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ATP1A3P13637 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.45■□□□□ 0.54
ATP1A3P13637 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.45■□□□□ 0.54
ATP1A3P13637 PAWRP1-201ENST00000451083 565 ntBASIC18.45■□□□□ 0.54
ATP1A3P13637 AC087388.1-201ENST00000571370 1112 ntBASIC18.45■□□□□ 0.54
ATP1A3P13637 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.45■□□□□ 0.54
ATP1A3P13637 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP1A3P13637 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.45■□□□□ 0.54
ATP1A3P13637 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.45■□□□□ 0.54
ATP1A3P13637 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP1A3P13637 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
ATP1A3P13637 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.45■□□□□ 0.54
ATP1A3P13637 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP1A3P13637 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.45■□□□□ 0.54
ATP1A3P13637 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ATP1A3P13637 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.45■□□□□ 0.54
ATP1A3P13637 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ATP1A3P13637 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.45■□□□□ 0.54
ATP1A3P13637 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
ATP1A3P13637 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP1A3P13637 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.44■□□□□ 0.54
ATP1A3P13637 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP1A3P13637 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.44■□□□□ 0.54
ATP1A3P13637 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.44■□□□□ 0.54
ATP1A3P13637 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP1A3P13637 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP1A3P13637 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ATP1A3P13637 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ATP1A3P13637 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP1A3P13637 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.44■□□□□ 0.54
ATP1A3P13637 KRT8P39-201ENST00000396270 1433 ntBASIC18.44■□□□□ 0.54
ATP1A3P13637 NCF1C-201ENST00000438382 1427 ntBASIC18.44■□□□□ 0.54
ATP1A3P13637 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP1A3P13637 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.44■□□□□ 0.54
ATP1A3P13637 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP1A3P13637 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.44■□□□□ 0.54
ATP1A3P13637 AC132008.2-207ENST00000454517 770 ntBASIC18.44■□□□□ 0.54
ATP1A3P13637 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ATP1A3P13637 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.44■□□□□ 0.54
ATP1A3P13637 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.44■□□□□ 0.54
ATP1A3P13637 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.44■□□□□ 0.54
ATP1A3P13637 AL591684.3-201ENST00000605187 298 ntBASIC18.44■□□□□ 0.54
ATP1A3P13637 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
ATP1A3P13637 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP1A3P13637 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ATP1A3P13637 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP1A3P13637 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.44■□□□□ 0.54
ATP1A3P13637 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP1A3P13637 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP1A3P13637 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP1A3P13637 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
ATP1A3P13637 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.43■□□□□ 0.54
ATP1A3P13637 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP1A3P13637 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP1A3P13637 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.43■□□□□ 0.54
ATP1A3P13637 AC104640.1-201ENST00000562617 2109 ntBASIC18.43■□□□□ 0.54
ATP1A3P13637 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms