Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 AC023157.3-201ENST00000619086 2088 ntBASIC14.59□□□□□ -0.07
SHISA3A0PJX4 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.59□□□□□ -0.07
SHISA3A0PJX4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 PMPCAP1-201ENST00000508114 1576 ntBASIC14.59□□□□□ -0.07
SHISA3A0PJX4 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 AC243591.1-201ENST00000452967 1364 ntBASIC14.59□□□□□ -0.07
SHISA3A0PJX4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SHISA3A0PJX4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
SHISA3A0PJX4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SHISA3A0PJX4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
SHISA3A0PJX4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SHISA3A0PJX4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.58□□□□□ -0.07
SHISA3A0PJX4 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SHISA3A0PJX4 SSR4P1-203ENST00000599569 2260 ntBASIC14.58□□□□□ -0.08
SHISA3A0PJX4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 AC136621.1-201ENST00000624017 2304 ntBASIC14.58□□□□□ -0.08
SHISA3A0PJX4 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SHISA3A0PJX4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms