Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.02■□□□□ 0.64
HOXC10Q9NYD6 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
HOXC10Q9NYD6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HOXC10Q9NYD6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HOXC10Q9NYD6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HOXC10Q9NYD6 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HOXC10Q9NYD6 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.02■□□□□ 0.64
HOXC10Q9NYD6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
HOXC10Q9NYD6 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.02■□□□□ 0.64
HOXC10Q9NYD6 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
HOXC10Q9NYD6 AC025048.6-201ENST00000634326 1161 ntBASIC19.02■□□□□ 0.64
HOXC10Q9NYD6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
HOXC10Q9NYD6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
HOXC10Q9NYD6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
HOXC10Q9NYD6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HOXC10Q9NYD6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.02■□□□□ 0.64
HOXC10Q9NYD6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.02■□□□□ 0.64
HOXC10Q9NYD6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.02■□□□□ 0.63
HOXC10Q9NYD6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HOXC10Q9NYD6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HOXC10Q9NYD6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.02■□□□□ 0.63
HOXC10Q9NYD6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.02■□□□□ 0.63
HOXC10Q9NYD6 AC068880.1-201ENST00000507289 2297 ntBASIC19.02■□□□□ 0.63
HOXC10Q9NYD6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
HOXC10Q9NYD6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HOXC10Q9NYD6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 GRAP-202ENST00000395635 834 ntTSL 2 BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 AC009407.1-201ENST00000568958 598 ntBASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC10Q9NYD6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19■□□□□ 0.63
HOXC10Q9NYD6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC10Q9NYD6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19■□□□□ 0.63
HOXC10Q9NYD6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC10Q9NYD6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC10Q9NYD6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19■□□□□ 0.63
HOXC10Q9NYD6 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19■□□□□ 0.63
HOXC10Q9NYD6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HOXC10Q9NYD6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19■□□□□ 0.63
HOXC10Q9NYD6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC10Q9NYD6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC10Q9NYD6 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC10Q9NYD6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC10Q9NYD6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19■□□□□ 0.63
HOXC10Q9NYD6 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
HOXC10Q9NYD6 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19■□□□□ 0.63
HOXC10Q9NYD6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC19■□□□□ 0.63
HOXC10Q9NYD6 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC10Q9NYD6 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC10Q9NYD6 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
HOXC10Q9NYD6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19■□□□□ 0.63
HOXC10Q9NYD6 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19■□□□□ 0.63
HOXC10Q9NYD6 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19■□□□□ 0.63
HOXC10Q9NYD6 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19■□□□□ 0.63
HOXC10Q9NYD6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19■□□□□ 0.63
HOXC10Q9NYD6 AL133215.2-201ENST00000609242 977 ntBASIC19■□□□□ 0.63
HOXC10Q9NYD6 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC19■□□□□ 0.63
HOXC10Q9NYD6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HOXC10Q9NYD6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19■□□□□ 0.63
HOXC10Q9NYD6 AL391256.1-201ENST00000443260 1855 ntBASIC19■□□□□ 0.63
HOXC10Q9NYD6 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
HOXC10Q9NYD6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC10Q9NYD6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC10Q9NYD6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19■□□□□ 0.63
HOXC10Q9NYD6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19■□□□□ 0.63
HOXC10Q9NYD6 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC10Q9NYD6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19■□□□□ 0.63
HOXC10Q9NYD6 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
HOXC10Q9NYD6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
HOXC10Q9NYD6 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC10Q9NYD6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms