Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
CHPFQ8IZ52 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHPFQ8IZ52 KRT8P49-201ENST00000604166 1432 ntBASIC17.02■□□□□ 0.31
CHPFQ8IZ52 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHPFQ8IZ52 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHPFQ8IZ52 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHPFQ8IZ52 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHPFQ8IZ52 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 FRMD8P1-201ENST00000440433 1524 ntBASIC17.01■□□□□ 0.31
CHPFQ8IZ52 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 MIR943-201ENST00000401286 94 ntBASIC17.01■□□□□ 0.31
CHPFQ8IZ52 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 AC107890.1-201ENST00000422478 521 ntBASIC17.01■□□□□ 0.31
CHPFQ8IZ52 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 AC026150.2-201ENST00000564693 1156 ntBASIC17.01■□□□□ 0.31
CHPFQ8IZ52 AC051619.7-201ENST00000568314 623 ntBASIC17.01■□□□□ 0.31
CHPFQ8IZ52 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 AL390955.2-201ENST00000603032 514 ntBASIC17.01■□□□□ 0.31
CHPFQ8IZ52 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHPFQ8IZ52 AC016027.1-202ENST00000607927 1699 ntBASIC17.01■□□□□ 0.31
CHPFQ8IZ52 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHPFQ8IZ52 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHPFQ8IZ52 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHPFQ8IZ52 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHPFQ8IZ52 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHPFQ8IZ52 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CHPFQ8IZ52 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CHPFQ8IZ52 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHPFQ8IZ52 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17■□□□□ 0.31
CHPFQ8IZ52 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHPFQ8IZ52 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHPFQ8IZ52 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHPFQ8IZ52 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17■□□□□ 0.31
CHPFQ8IZ52 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17■□□□□ 0.31
CHPFQ8IZ52 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17■□□□□ 0.31
CHPFQ8IZ52 SPDYE7P-202ENST00000420373 878 ntBASIC17■□□□□ 0.31
CHPFQ8IZ52 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17■□□□□ 0.31
CHPFQ8IZ52 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17■□□□□ 0.31
CHPFQ8IZ52 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17■□□□□ 0.31
CHPFQ8IZ52 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17■□□□□ 0.31
CHPFQ8IZ52 SLC25A39P2-201ENST00000537614 270 ntBASIC17■□□□□ 0.31
CHPFQ8IZ52 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17■□□□□ 0.31
CHPFQ8IZ52 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17■□□□□ 0.31
CHPFQ8IZ52 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CHPFQ8IZ52 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHPFQ8IZ52 AC008267.7-201ENST00000624570 1194 ntBASIC17■□□□□ 0.31
CHPFQ8IZ52 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17■□□□□ 0.31
CHPFQ8IZ52 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17■□□□□ 0.31
CHPFQ8IZ52 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
CHPFQ8IZ52 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17■□□□□ 0.31
CHPFQ8IZ52 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHPFQ8IZ52 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17■□□□□ 0.31
CHPFQ8IZ52 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHPFQ8IZ52 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CHPFQ8IZ52 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CHPFQ8IZ52 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHPFQ8IZ52 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHPFQ8IZ52 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHPFQ8IZ52 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CHPFQ8IZ52 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CHPFQ8IZ52 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHPFQ8IZ52 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHPFQ8IZ52 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHPFQ8IZ52 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHPFQ8IZ52 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHPFQ8IZ52 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CHPFQ8IZ52 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHPFQ8IZ52 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms