Protein–RNA interactions for Protein: Q68CL5

TPGS2, Tubulin polyglutamylase complex subunit 2, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2Q68CL5 AL512652.2-201ENST00000625156 1716 ntBASIC17.39■□□□□ 0.37
TPGS2Q68CL5 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 MIR661-201ENST00000384842 89 ntBASIC17.39■□□□□ 0.37
TPGS2Q68CL5 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 LINC02560-201ENST00000596379 459 ntBASIC17.39■□□□□ 0.37
TPGS2Q68CL5 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 AL645728.1-201ENST00000366221 2101 ntBASIC17.39■□□□□ 0.37
TPGS2Q68CL5 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TPGS2Q68CL5 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TPGS2Q68CL5 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPGS2Q68CL5 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPGS2Q68CL5 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
TPGS2Q68CL5 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.38■□□□□ 0.37
TPGS2Q68CL5 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPGS2Q68CL5 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPGS2Q68CL5 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPGS2Q68CL5 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPGS2Q68CL5 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPGS2Q68CL5 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TPGS2Q68CL5 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPGS2Q68CL5 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPGS2Q68CL5 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPGS2Q68CL5 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.38■□□□□ 0.37
TPGS2Q68CL5 TSSK5P-201ENST00000423978 907 ntBASIC17.38■□□□□ 0.37
TPGS2Q68CL5 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPGS2Q68CL5 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.38■□□□□ 0.37
TPGS2Q68CL5 RNA5SP410-201ENST00000516285 106 ntBASIC17.38■□□□□ 0.37
TPGS2Q68CL5 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.38■□□□□ 0.37
TPGS2Q68CL5 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.38■□□□□ 0.37
TPGS2Q68CL5 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
TPGS2Q68CL5 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TPGS2Q68CL5 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPGS2Q68CL5 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TPGS2Q68CL5 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TPGS2Q68CL5 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPGS2Q68CL5 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.38■□□□□ 0.37
TPGS2Q68CL5 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPGS2Q68CL5 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPGS2Q68CL5 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPGS2Q68CL5 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPGS2Q68CL5 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TPGS2Q68CL5 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPGS2Q68CL5 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPGS2Q68CL5 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPGS2Q68CL5 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPGS2Q68CL5 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPGS2Q68CL5 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPGS2Q68CL5 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPGS2Q68CL5 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.37■□□□□ 0.37
TPGS2Q68CL5 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPGS2Q68CL5 AC093724.1-201ENST00000448659 1027 ntBASIC17.37■□□□□ 0.37
TPGS2Q68CL5 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.37■□□□□ 0.37
TPGS2Q68CL5 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPGS2Q68CL5 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.37■□□□□ 0.37
TPGS2Q68CL5 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.37■□□□□ 0.37
TPGS2Q68CL5 RN7SL828P-201ENST00000607615 303 ntBASIC17.37■□□□□ 0.37
TPGS2Q68CL5 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPGS2Q68CL5 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.37■□□□□ 0.37
TPGS2Q68CL5 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPGS2Q68CL5 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TPGS2Q68CL5 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPGS2Q68CL5 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TPGS2Q68CL5 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPGS2Q68CL5 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPGS2Q68CL5 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms