Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.7□□□□□ -0.22
SPCS3P61009 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.7□□□□□ -0.22
SPCS3P61009 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.7□□□□□ -0.22
SPCS3P61009 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.7□□□□□ -0.22
SPCS3P61009 AC073592.5-201ENST00000624854 528 ntBASIC13.7□□□□□ -0.22
SPCS3P61009 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS3P61009 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS3P61009 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
SPCS3P61009 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS3P61009 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS3P61009 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SPCS3P61009 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
SPCS3P61009 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS3P61009 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS3P61009 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS3P61009 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.7□□□□□ -0.22
SPCS3P61009 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
SPCS3P61009 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS3P61009 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS3P61009 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS3P61009 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS3P61009 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS3P61009 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SPCS3P61009 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS3P61009 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS3P61009 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SPCS3P61009 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.69□□□□□ -0.22
SPCS3P61009 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.69□□□□□ -0.22
SPCS3P61009 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SPCS3P61009 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SPCS3P61009 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.69□□□□□ -0.22
SPCS3P61009 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SPCS3P61009 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.69□□□□□ -0.22
SPCS3P61009 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
SPCS3P61009 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SPCS3P61009 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SPCS3P61009 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SPCS3P61009 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.69□□□□□ -0.22
SPCS3P61009 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
SPCS3P61009 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SPCS3P61009 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.69□□□□□ -0.22
SPCS3P61009 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SPCS3P61009 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SPCS3P61009 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SPCS3P61009 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.69□□□□□ -0.22
SPCS3P61009 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.69□□□□□ -0.22
SPCS3P61009 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.69□□□□□ -0.22
SPCS3P61009 AL671277.2-201ENST00000458060 996 ntBASIC13.69□□□□□ -0.22
SPCS3P61009 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC13.69□□□□□ -0.22
SPCS3P61009 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.69□□□□□ -0.22
SPCS3P61009 KRT8P26-201ENST00000534154 1276 ntBASIC13.69□□□□□ -0.22
SPCS3P61009 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SPCS3P61009 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.69□□□□□ -0.22
SPCS3P61009 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.69□□□□□ -0.22
SPCS3P61009 LINC01238-205ENST00000567549 1107 ntBASIC13.69□□□□□ -0.22
SPCS3P61009 AC011498.5-201ENST00000592027 486 ntBASIC13.69□□□□□ -0.22
SPCS3P61009 AC011467.2-201ENST00000598425 242 ntBASIC13.69□□□□□ -0.22
SPCS3P61009 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SPCS3P61009 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.69□□□□□ -0.22
SPCS3P61009 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SPCS3P61009 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.69□□□□□ -0.22
SPCS3P61009 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SPCS3P61009 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.69□□□□□ -0.22
SPCS3P61009 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SPCS3P61009 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SPCS3P61009 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SPCS3P61009 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SPCS3P61009 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SPCS3P61009 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SPCS3P61009 AL021920.2-201ENST00000624828 1351 ntBASIC13.69□□□□□ -0.22
SPCS3P61009 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SPCS3P61009 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SPCS3P61009 AC022188.1-201ENST00000620960 1664 ntBASIC13.69□□□□□ -0.22
SPCS3P61009 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SPCS3P61009 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
SPCS3P61009 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
SPCS3P61009 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPCS3P61009 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.68□□□□□ -0.22
SPCS3P61009 FAM45BP-202ENST00000592932 1624 ntBASIC13.68□□□□□ -0.22
SPCS3P61009 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPCS3P61009 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.68□□□□□ -0.22
SPCS3P61009 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SPCS3P61009 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SPCS3P61009 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPCS3P61009 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPCS3P61009 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SPCS3P61009 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPCS3P61009 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.68□□□□□ -0.22
SPCS3P61009 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPCS3P61009 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPCS3P61009 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.68□□□□□ -0.22
SPCS3P61009 AC063952.2-201ENST00000498792 1227 ntBASIC13.68□□□□□ -0.22
SPCS3P61009 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
SPCS3P61009 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.68□□□□□ -0.22
SPCS3P61009 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPCS3P61009 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.68□□□□□ -0.22
SPCS3P61009 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SPCS3P61009 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SPCS3P61009 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SPCS3P61009 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms