Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 AP001269.4-201ENST00000609611 512 ntBASIC15.19■□□□□ 0.02
TMEM129A0AVI4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM129A0AVI4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 LINC00895-201ENST00000629028 1637 ntBASIC15.18■□□□□ 0.02
TMEM129A0AVI4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 FAM220CP-201ENST00000395253 831 ntBASIC15.18■□□□□ 0.02
TMEM129A0AVI4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 ABCD1P5-201ENST00000445663 754 ntBASIC15.18■□□□□ 0.02
TMEM129A0AVI4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 AC106795.1-205ENST00000512851 1056 ntBASIC15.18■□□□□ 0.02
TMEM129A0AVI4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 AL355877.3-201ENST00000622820 899 ntBASIC15.18■□□□□ 0.02
TMEM129A0AVI4 TP73-AS1-207ENST00000624167 988 ntBASIC15.18■□□□□ 0.02
TMEM129A0AVI4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 AL353593.2-201ENST00000602529 1483 ntBASIC15.18■□□□□ 0.02
TMEM129A0AVI4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM129A0AVI4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 AP005117.1-201ENST00000584346 1413 ntBASIC15.17■□□□□ 0.02
TMEM129A0AVI4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms