Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 AC132872.4-202ENST00000622924 2756 ntBASIC17.08■□□□□ 0.32
CFAP61Q8NHU2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CFAP61Q8NHU2 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CFAP61Q8NHU2 AC104640.1-201ENST00000562617 2109 ntBASIC17.08■□□□□ 0.32
CFAP61Q8NHU2 AC005915.1-201ENST00000624912 2018 ntBASIC17.08■□□□□ 0.32
CFAP61Q8NHU2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 AC046185.3-201ENST00000623228 1824 ntBASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP61Q8NHU2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 AC004817.3-201ENST00000602957 2129 ntBASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 AC003669.1-201ENST00000334569 611 ntBASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 AL450487.1-201ENST00000426799 995 ntBASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 AC008608.2-201ENST00000606089 416 ntBASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 AC092850.2-201ENST00000623821 2697 ntBASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.06■□□□□ 0.32
CFAP61Q8NHU2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CFAP61Q8NHU2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CFAP61Q8NHU2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CFAP61Q8NHU2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.05■□□□□ 0.32
CFAP61Q8NHU2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CFAP61Q8NHU2 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.05■□□□□ 0.32
CFAP61Q8NHU2 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
CFAP61Q8NHU2 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
CFAP61Q8NHU2 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CFAP61Q8NHU2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.05■□□□□ 0.32
CFAP61Q8NHU2 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CFAP61Q8NHU2 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.05■□□□□ 0.32
CFAP61Q8NHU2 AKR1C7P-201ENST00000305623 895 ntBASIC17.05■□□□□ 0.32
CFAP61Q8NHU2 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CFAP61Q8NHU2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.05■□□□□ 0.32
CFAP61Q8NHU2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CFAP61Q8NHU2 EMBP1-201ENST00000458200 901 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms