Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KLHL41O60662 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
KLHL41O60662 HLA-A-202ENST00000376806 1854 ntBASIC16.72■□□□□ 0.27
KLHL41O60662 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KLHL41O60662 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KLHL41O60662 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KLHL41O60662 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KLHL41O60662 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
KLHL41O60662 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KLHL41O60662 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KLHL41O60662 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KLHL41O60662 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
KLHL41O60662 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
KLHL41O60662 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
KLHL41O60662 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KLHL41O60662 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.72■□□□□ 0.27
KLHL41O60662 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.72■□□□□ 0.27
KLHL41O60662 AC073648.2-201ENST00000510116 352 ntBASIC16.72■□□□□ 0.27
KLHL41O60662 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.72■□□□□ 0.27
KLHL41O60662 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.72■□□□□ 0.27
KLHL41O60662 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KLHL41O60662 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.72■□□□□ 0.27
KLHL41O60662 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.72■□□□□ 0.27
KLHL41O60662 AC120114.3-201ENST00000611923 658 ntBASIC16.72■□□□□ 0.27
KLHL41O60662 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
KLHL41O60662 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
KLHL41O60662 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.72■□□□□ 0.27
KLHL41O60662 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.72■□□□□ 0.27
KLHL41O60662 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
KLHL41O60662 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KLHL41O60662 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
KLHL41O60662 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KLHL41O60662 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KLHL41O60662 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
KLHL41O60662 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.72■□□□□ 0.27
KLHL41O60662 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KLHL41O60662 TSPY26P-202ENST00000565928 3884 ntBASIC16.71■□□□□ 0.27
KLHL41O60662 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KLHL41O60662 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
KLHL41O60662 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
KLHL41O60662 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.71■□□□□ 0.27
KLHL41O60662 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.71■□□□□ 0.27
KLHL41O60662 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
KLHL41O60662 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.71■□□□□ 0.27
KLHL41O60662 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KLHL41O60662 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KLHL41O60662 MRPL3P1-201ENST00000400109 1033 ntBASIC16.71■□□□□ 0.27
KLHL41O60662 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
KLHL41O60662 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.71■□□□□ 0.27
KLHL41O60662 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.71■□□□□ 0.27
KLHL41O60662 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.71■□□□□ 0.27
KLHL41O60662 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.71■□□□□ 0.27
KLHL41O60662 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.71■□□□□ 0.27
KLHL41O60662 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KLHL41O60662 AC008608.2-201ENST00000606089 416 ntBASIC16.71■□□□□ 0.27
KLHL41O60662 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KLHL41O60662 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
KLHL41O60662 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KLHL41O60662 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
KLHL41O60662 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KLHL41O60662 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.71■□□□□ 0.27
KLHL41O60662 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.71■□□□□ 0.27
KLHL41O60662 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KLHL41O60662 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.71■□□□□ 0.27
KLHL41O60662 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.71■□□□□ 0.27
KLHL41O60662 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KLHL41O60662 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
KLHL41O60662 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
KLHL41O60662 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
KLHL41O60662 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL41O60662 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL41O60662 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL41O60662 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL41O60662 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL41O60662 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL41O60662 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
KLHL41O60662 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL41O60662 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
KLHL41O60662 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.7■□□□□ 0.26
KLHL41O60662 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL41O60662 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL41O60662 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL41O60662 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL41O60662 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL41O60662 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL41O60662 AC007967.3-201ENST00000434308 558 ntBASIC16.7■□□□□ 0.26
KLHL41O60662 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.7■□□□□ 0.26
KLHL41O60662 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.7■□□□□ 0.26
KLHL41O60662 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.7■□□□□ 0.26
KLHL41O60662 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.7■□□□□ 0.26
KLHL41O60662 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.7■□□□□ 0.26
KLHL41O60662 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.7■□□□□ 0.26
KLHL41O60662 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.7■□□□□ 0.26
KLHL41O60662 AC023511.2-201ENST00000618803 211 ntBASIC16.7■□□□□ 0.26
KLHL41O60662 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
KLHL41O60662 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL41O60662 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
KLHL41O60662 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL41O60662 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.7■□□□□ 0.26
KLHL41O60662 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms