Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 TSPY22P-201ENST00000427496 604 ntBASIC20.67■□□□□ 0.9
UPF2Q9HAU5 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 IGHV3-41-201ENST00000613121 348 ntBASIC20.67■□□□□ 0.9
UPF2Q9HAU5 AC073592.5-201ENST00000624854 528 ntBASIC20.67■□□□□ 0.9
UPF2Q9HAU5 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UPF2Q9HAU5 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 TERF1P1-201ENST00000311003 1181 ntBASIC20.66■□□□□ 0.9
UPF2Q9HAU5 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UPF2Q9HAU5 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 LINC00554-201ENST00000564841 3011 ntBASIC20.65■□□□□ 0.9
UPF2Q9HAU5 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 AD001527.2-201ENST00000622994 785 ntBASIC20.65■□□□□ 0.9
UPF2Q9HAU5 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms