Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AF228730.7-201ENST00000641842 219 ntBASIC16.8■□□□□ 0.28
CPNE1Q99829 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.8■□□□□ 0.28
CPNE1Q99829 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CPNE1Q99829 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.8■□□□□ 0.28
CPNE1Q99829 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE1Q99829 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
CPNE1Q99829 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.8■□□□□ 0.28
CPNE1Q99829 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE1Q99829 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE1Q99829 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CPNE1Q99829 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CPNE1Q99829 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE1Q99829 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CPNE1Q99829 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE1Q99829 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CPNE1Q99829 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE1Q99829 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE1Q99829 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE1Q99829 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CPNE1Q99829 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE1Q99829 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE1Q99829 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.79■□□□□ 0.28
CPNE1Q99829 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE1Q99829 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.79■□□□□ 0.28
CPNE1Q99829 AL671710.1-201ENST00000610245 2349 ntBASIC16.79■□□□□ 0.28
CPNE1Q99829 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE1Q99829 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.79■□□□□ 0.28
CPNE1Q99829 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE1Q99829 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE1Q99829 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE1Q99829 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE1Q99829 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE1Q99829 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE1Q99829 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CPNE1Q99829 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.79■□□□□ 0.28
CPNE1Q99829 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.79■□□□□ 0.28
CPNE1Q99829 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE1Q99829 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.79■□□□□ 0.28
CPNE1Q99829 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.79■□□□□ 0.28
CPNE1Q99829 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.79■□□□□ 0.28
CPNE1Q99829 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.79■□□□□ 0.28
CPNE1Q99829 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.79■□□□□ 0.28
CPNE1Q99829 AL355877.3-201ENST00000622820 899 ntBASIC16.79■□□□□ 0.28
CPNE1Q99829 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.79■□□□□ 0.28
CPNE1Q99829 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.79■□□□□ 0.28
CPNE1Q99829 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
CPNE1Q99829 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.79■□□□□ 0.28
CPNE1Q99829 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE1Q99829 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE1Q99829 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CPNE1Q99829 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE1Q99829 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CPNE1Q99829 AL512652.2-201ENST00000625156 1716 ntBASIC16.79■□□□□ 0.28
CPNE1Q99829 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.79■□□□□ 0.28
CPNE1Q99829 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.78■□□□□ 0.28
CPNE1Q99829 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE1Q99829 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.78■□□□□ 0.28
CPNE1Q99829 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE1Q99829 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE1Q99829 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE1Q99829 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE1Q99829 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE1Q99829 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE1Q99829 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE1Q99829 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE1Q99829 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CPNE1Q99829 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE1Q99829 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE1Q99829 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE1Q99829 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE1Q99829 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.78■□□□□ 0.28
CPNE1Q99829 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE1Q99829 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
CPNE1Q99829 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.78■□□□□ 0.28
CPNE1Q99829 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE1Q99829 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.78■□□□□ 0.28
CPNE1Q99829 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.78■□□□□ 0.28
CPNE1Q99829 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE1Q99829 AC087163.2-201ENST00000457299 853 ntBASIC16.78■□□□□ 0.28
CPNE1Q99829 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.78■□□□□ 0.28
CPNE1Q99829 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.78■□□□□ 0.28
CPNE1Q99829 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.78■□□□□ 0.28
CPNE1Q99829 AC004706.3-202ENST00000621574 984 ntBASIC16.78■□□□□ 0.28
CPNE1Q99829 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE1Q99829 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE1Q99829 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE1Q99829 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CPNE1Q99829 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE1Q99829 CICP6-201ENST00000457191 2729 ntBASIC16.78■□□□□ 0.28
CPNE1Q99829 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE1Q99829 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
CPNE1Q99829 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.78■□□□□ 0.28
CPNE1Q99829 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE1Q99829 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE1Q99829 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.78■□□□□ 0.28
CPNE1Q99829 KRT8P39-201ENST00000396270 1433 ntBASIC16.78■□□□□ 0.28
CPNE1Q99829 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE1Q99829 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE1Q99829 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE1Q99829 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms