Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AC144831.1-201ENST00000573312 2656 ntBASIC14.49□□□□□ -0.09
CMTM3Q96MX0 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 AC073347.1-201ENST00000421633 2643 ntBASIC14.48□□□□□ -0.09
CMTM3Q96MX0 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 AC013268.4-201ENST00000637413 2228 ntBASIC14.48□□□□□ -0.09
CMTM3Q96MX0 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 STARP1-201ENST00000397973 869 ntBASIC14.48□□□□□ -0.09
CMTM3Q96MX0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 KLF4P1-201ENST00000412782 1185 ntBASIC14.48□□□□□ -0.09
CMTM3Q96MX0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 AL353801.3-201ENST00000609898 542 ntBASIC14.48□□□□□ -0.09
CMTM3Q96MX0 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 AC132938.5-201ENST00000624980 1813 ntBASIC14.48□□□□□ -0.09
CMTM3Q96MX0 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMTM3Q96MX0 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 LINC02447-202ENST00000501888 2146 ntBASIC14.47□□□□□ -0.09
CMTM3Q96MX0 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 AC023157.3-201ENST00000619086 2088 ntBASIC14.47□□□□□ -0.09
CMTM3Q96MX0 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 AC140113.3-201ENST00000605663 199 ntBASIC14.47□□□□□ -0.09
CMTM3Q96MX0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 AL138966.2-201ENST00000621997 464 ntBASIC14.47□□□□□ -0.09
CMTM3Q96MX0 AD001527.2-201ENST00000622994 785 ntBASIC14.47□□□□□ -0.09
CMTM3Q96MX0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CMTM3Q96MX0 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CMTM3Q96MX0 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CMTM3Q96MX0 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms