Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.76□□□□□ -0.21
SSSCA1O60232 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSSCA1O60232 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.76□□□□□ -0.21
SSSCA1O60232 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.76□□□□□ -0.21
SSSCA1O60232 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
SSSCA1O60232 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.76□□□□□ -0.21
SSSCA1O60232 CLN6-221ENST00000637494 765 ntTSL 5 BASIC13.76□□□□□ -0.21
SSSCA1O60232 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SSSCA1O60232 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SSSCA1O60232 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SSSCA1O60232 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSSCA1O60232 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.76□□□□□ -0.21
SSSCA1O60232 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSSCA1O60232 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSSCA1O60232 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSSCA1O60232 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
SSSCA1O60232 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSSCA1O60232 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSSCA1O60232 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SSSCA1O60232 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSSCA1O60232 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSSCA1O60232 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SSSCA1O60232 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SSSCA1O60232 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSSCA1O60232 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
SSSCA1O60232 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SSSCA1O60232 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSSCA1O60232 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SSSCA1O60232 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.75□□□□□ -0.21
SSSCA1O60232 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.75□□□□□ -0.21
SSSCA1O60232 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
SSSCA1O60232 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC13.75□□□□□ -0.21
SSSCA1O60232 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SSSCA1O60232 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSSCA1O60232 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.75□□□□□ -0.21
SSSCA1O60232 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SSSCA1O60232 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.75□□□□□ -0.21
SSSCA1O60232 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.75□□□□□ -0.21
SSSCA1O60232 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SSSCA1O60232 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SSSCA1O60232 KRT8P10-201ENST00000450021 1447 ntBASIC13.75□□□□□ -0.21
SSSCA1O60232 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
SSSCA1O60232 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
SSSCA1O60232 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSSCA1O60232 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SSSCA1O60232 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SSSCA1O60232 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SSSCA1O60232 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.75□□□□□ -0.21
SSSCA1O60232 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSSCA1O60232 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSSCA1O60232 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.75□□□□□ -0.21
SSSCA1O60232 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSSCA1O60232 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSSCA1O60232 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.75□□□□□ -0.21
SSSCA1O60232 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSSCA1O60232 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SSSCA1O60232 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSSCA1O60232 CRAT-202ENST00000393384 973 ntTSL 2 BASIC13.75□□□□□ -0.21
SSSCA1O60232 SPDYE15P-201ENST00000424157 909 ntBASIC13.75□□□□□ -0.21
SSSCA1O60232 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSSCA1O60232 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSSCA1O60232 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC13.75□□□□□ -0.21
SSSCA1O60232 HLA-J-202ENST00000469281 1241 ntBASIC13.75□□□□□ -0.21
SSSCA1O60232 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.75□□□□□ -0.21
SSSCA1O60232 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.75□□□□□ -0.21
SSSCA1O60232 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.75□□□□□ -0.21
SSSCA1O60232 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.75□□□□□ -0.21
SSSCA1O60232 AC140113.3-201ENST00000605663 199 ntBASIC13.75□□□□□ -0.21
SSSCA1O60232 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSSCA1O60232 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSSCA1O60232 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSSCA1O60232 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSSCA1O60232 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SSSCA1O60232 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSSCA1O60232 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.75□□□□□ -0.21
SSSCA1O60232 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SSSCA1O60232 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSSCA1O60232 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSSCA1O60232 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSSCA1O60232 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SSSCA1O60232 AL596087.1-201ENST00000400979 1969 ntBASIC13.74□□□□□ -0.21
SSSCA1O60232 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SSSCA1O60232 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.74□□□□□ -0.21
SSSCA1O60232 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SSSCA1O60232 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
SSSCA1O60232 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 KRT17P2-201ENST00000300992 1314 ntBASIC13.74□□□□□ -0.21
SSSCA1O60232 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.74□□□□□ -0.21
SSSCA1O60232 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SSSCA1O60232 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.74□□□□□ -0.21
SSSCA1O60232 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms