Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDC42BPBQ9Y5S2 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDC42BPBQ9Y5S2 AL031731.1-201ENST00000642131 2094 ntBASIC24.96■■□□□ 1.59
CDC42BPBQ9Y5S2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC24.96■■□□□ 1.59
CDC42BPBQ9Y5S2 GALT-202ENST00000450095 1280 ntTSL 2 BASIC24.96■■□□□ 1.59
CDC42BPBQ9Y5S2 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CDC42BPBQ9Y5S2 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC24.96■■□□□ 1.59
CDC42BPBQ9Y5S2 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC24.96■■□□□ 1.59
CDC42BPBQ9Y5S2 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC24.96■■□□□ 1.59
CDC42BPBQ9Y5S2 ORC6-206ENST00000568364 888 ntTSL 5 BASIC24.96■■□□□ 1.59
CDC42BPBQ9Y5S2 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
CDC42BPBQ9Y5S2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDC42BPBQ9Y5S2 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDC42BPBQ9Y5S2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC24.96■■□□□ 1.59
CDC42BPBQ9Y5S2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CDC42BPBQ9Y5S2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC24.96■■□□□ 1.59
CDC42BPBQ9Y5S2 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC24.95■■□□□ 1.59
CDC42BPBQ9Y5S2 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC24.95■■□□□ 1.59
CDC42BPBQ9Y5S2 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
CDC42BPBQ9Y5S2 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.59
CDC42BPBQ9Y5S2 AC007389.4-201ENST00000454674 793 ntBASIC24.95■■□□□ 1.59
CDC42BPBQ9Y5S2 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
CDC42BPBQ9Y5S2 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC24.95■■□□□ 1.59
CDC42BPBQ9Y5S2 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC24.95■■□□□ 1.59
CDC42BPBQ9Y5S2 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC24.95■■□□□ 1.59
CDC42BPBQ9Y5S2 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
CDC42BPBQ9Y5S2 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
CDC42BPBQ9Y5S2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
CDC42BPBQ9Y5S2 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
CDC42BPBQ9Y5S2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
CDC42BPBQ9Y5S2 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
CDC42BPBQ9Y5S2 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CDC42BPBQ9Y5S2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC24.95■■□□□ 1.58
CDC42BPBQ9Y5S2 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC24.95■■□□□ 1.58
CDC42BPBQ9Y5S2 RRP7BP-205ENST00000566851 833 ntBASIC24.95■■□□□ 1.58
CDC42BPBQ9Y5S2 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CDC42BPBQ9Y5S2 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CDC42BPBQ9Y5S2 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CDC42BPBQ9Y5S2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CDC42BPBQ9Y5S2 FST-202ENST00000396947 2538 ntTSL 5 BASIC24.94■■□□□ 1.58
CDC42BPBQ9Y5S2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
CDC42BPBQ9Y5S2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
CDC42BPBQ9Y5S2 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC24.94■■□□□ 1.58
CDC42BPBQ9Y5S2 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CDC42BPBQ9Y5S2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CDC42BPBQ9Y5S2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
CDC42BPBQ9Y5S2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CDC42BPBQ9Y5S2 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC24.94■■□□□ 1.58
CDC42BPBQ9Y5S2 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
CDC42BPBQ9Y5S2 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CDC42BPBQ9Y5S2 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC24.94■■□□□ 1.58
CDC42BPBQ9Y5S2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
CDC42BPBQ9Y5S2 GPAA1P2-202ENST00000606848 1787 ntBASIC24.94■■□□□ 1.58
CDC42BPBQ9Y5S2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CDC42BPBQ9Y5S2 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC24.94■■□□□ 1.58
CDC42BPBQ9Y5S2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC24.94■■□□□ 1.58
CDC42BPBQ9Y5S2 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC24.94■■□□□ 1.58
CDC42BPBQ9Y5S2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC24.94■■□□□ 1.58
CDC42BPBQ9Y5S2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CDC42BPBQ9Y5S2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC24.93■■□□□ 1.58
CDC42BPBQ9Y5S2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC24.93■■□□□ 1.58
CDC42BPBQ9Y5S2 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
CDC42BPBQ9Y5S2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
CDC42BPBQ9Y5S2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CDC42BPBQ9Y5S2 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CDC42BPBQ9Y5S2 KRT223P-202ENST00000449164 1292 ntBASIC24.93■■□□□ 1.58
CDC42BPBQ9Y5S2 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC24.93■■□□□ 1.58
CDC42BPBQ9Y5S2 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC24.93■■□□□ 1.58
CDC42BPBQ9Y5S2 AC025048.3-201ENST00000590609 569 ntBASIC24.93■■□□□ 1.58
CDC42BPBQ9Y5S2 AC005702.4-201ENST00000618393 416 ntBASIC24.93■■□□□ 1.58
CDC42BPBQ9Y5S2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CDC42BPBQ9Y5S2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CDC42BPBQ9Y5S2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC24.93■■□□□ 1.58
CDC42BPBQ9Y5S2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
CDC42BPBQ9Y5S2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CDC42BPBQ9Y5S2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC24.93■■□□□ 1.58
CDC42BPBQ9Y5S2 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC24.93■■□□□ 1.58
CDC42BPBQ9Y5S2 AL512652.2-201ENST00000625156 1716 ntBASIC24.93■■□□□ 1.58
CDC42BPBQ9Y5S2 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
CDC42BPBQ9Y5S2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CDC42BPBQ9Y5S2 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC24.93■■□□□ 1.58
CDC42BPBQ9Y5S2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 WNT11-204ENST00000621122 789 ntTSL 5 BASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC24.92■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms