Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
PIF1Q9H611 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PIF1Q9H611 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PIF1Q9H611 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PIF1Q9H611 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.13■□□□□ 0.17
PIF1Q9H611 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.13■□□□□ 0.17
PIF1Q9H611 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PIF1Q9H611 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PIF1Q9H611 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.13■□□□□ 0.17
PIF1Q9H611 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PIF1Q9H611 MIR1224-201ENST00000408193 85 ntBASIC16.13■□□□□ 0.17
PIF1Q9H611 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PIF1Q9H611 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.13■□□□□ 0.17
PIF1Q9H611 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.13■□□□□ 0.17
PIF1Q9H611 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.13■□□□□ 0.17
PIF1Q9H611 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.13■□□□□ 0.17
PIF1Q9H611 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.13■□□□□ 0.17
PIF1Q9H611 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.13■□□□□ 0.17
PIF1Q9H611 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.13■□□□□ 0.17
PIF1Q9H611 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.13■□□□□ 0.17
PIF1Q9H611 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
PIF1Q9H611 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.13■□□□□ 0.17
PIF1Q9H611 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PIF1Q9H611 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.13■□□□□ 0.17
PIF1Q9H611 AL353593.2-201ENST00000602529 1483 ntBASIC16.13■□□□□ 0.17
PIF1Q9H611 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PIF1Q9H611 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PIF1Q9H611 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.13■□□□□ 0.17
PIF1Q9H611 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PIF1Q9H611 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PIF1Q9H611 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PIF1Q9H611 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PIF1Q9H611 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.13■□□□□ 0.17
PIF1Q9H611 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PIF1Q9H611 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.13■□□□□ 0.17
PIF1Q9H611 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.13■□□□□ 0.17
PIF1Q9H611 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PIF1Q9H611 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PIF1Q9H611 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.13■□□□□ 0.17
PIF1Q9H611 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PIF1Q9H611 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.12■□□□□ 0.17
PIF1Q9H611 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PIF1Q9H611 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
PIF1Q9H611 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PIF1Q9H611 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PIF1Q9H611 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PIF1Q9H611 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PIF1Q9H611 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PIF1Q9H611 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PIF1Q9H611 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PIF1Q9H611 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PIF1Q9H611 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PIF1Q9H611 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PIF1Q9H611 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.12■□□□□ 0.17
PIF1Q9H611 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PIF1Q9H611 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PIF1Q9H611 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.12■□□□□ 0.17
PIF1Q9H611 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PIF1Q9H611 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PIF1Q9H611 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PIF1Q9H611 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.12■□□□□ 0.17
PIF1Q9H611 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PIF1Q9H611 FAM86EP-206ENST00000510506 987 ntBASIC16.12■□□□□ 0.17
PIF1Q9H611 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.12■□□□□ 0.17
PIF1Q9H611 AC087388.1-201ENST00000571370 1112 ntBASIC16.12■□□□□ 0.17
PIF1Q9H611 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.12■□□□□ 0.17
PIF1Q9H611 AC010331.1-201ENST00000611423 582 ntBASIC16.12■□□□□ 0.17
PIF1Q9H611 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PIF1Q9H611 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PIF1Q9H611 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.12■□□□□ 0.17
PIF1Q9H611 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PIF1Q9H611 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PIF1Q9H611 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
PIF1Q9H611 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PIF1Q9H611 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PIF1Q9H611 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.12■□□□□ 0.17
PIF1Q9H611 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PIF1Q9H611 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PIF1Q9H611 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PIF1Q9H611 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PIF1Q9H611 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.11■□□□□ 0.17
PIF1Q9H611 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PIF1Q9H611 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PIF1Q9H611 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PIF1Q9H611 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PIF1Q9H611 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PIF1Q9H611 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
PIF1Q9H611 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PIF1Q9H611 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.11■□□□□ 0.17
PIF1Q9H611 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PIF1Q9H611 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PIF1Q9H611 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PIF1Q9H611 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PIF1Q9H611 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PIF1Q9H611 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PIF1Q9H611 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.11■□□□□ 0.17
PIF1Q9H611 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.11■□□□□ 0.17
PIF1Q9H611 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.11■□□□□ 0.17
PIF1Q9H611 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PIF1Q9H611 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms